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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 01, 2011 |
| Title |
SA_260 |
| Sample type |
RNA |
| |
|
| Source name |
Severe asthma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: white blood cells
age: 15.6
Sex: male
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Ambion RiboPure blood extraction kit including DNAse treatment
|
| Label |
biotin
|
| Label protocol |
Acccording to affymetrix standard proceedures
|
| |
|
| Hybridization protocol |
Acccording to affymetrix standard proceedures
|
| Scan protocol |
Acccording to affymetrix standard proceedures
|
| Description |
Patient with severe, therapy resistent asthma
|
| Data processing |
affy package, justRMA, limma (Bioconductor)
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| |
|
| Submission date |
Feb 02, 2011 |
| Last update date |
Dec 01, 2011 |
| Contact name |
Christina Orsmark Pietras |
| Organization name |
Karolinska Institutet
|
| Street address |
Hälsovägen 7-9
|
| City |
Stockholm |
| ZIP/Postal code |
11767 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL6244 |
| Series (1) |
| GSE27011 |
Expression data from severe asthmatics, mild asthmatics and healthy controls |
|
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Pre processed, normalized, log2 expression values |
| Data table |
| ID_REF |
VALUE |
| 7896746 |
8.80000036345858 |
| 7896756 |
4.83750963804263 |
| 7896759 |
6.52120151974864 |
| 7896761 |
6.2864513815256 |
| 7896779 |
6.71332501456182 |
| 7896798 |
6.7097533848912 |
| 7896817 |
6.38115437458482 |
| 7896822 |
5.91938865503326 |
| 7896859 |
5.5442832363588 |
| 7896861 |
3.41744292372655 |
| 7896863 |
5.22288239255816 |
| 7896865 |
7.12290936351919 |
| 7896878 |
7.02943739294009 |
| 7896882 |
6.21048711013946 |
| 7896908 |
6.7900896301452 |
| 7896917 |
6.7313609157633 |
| 7896921 |
6.64733725315043 |
| 7896929 |
6.35217200462382 |
| 7896937 |
5.16664982623109 |
| 7896952 |
6.92707043576997 |
Total number of rows: 28231
Table truncated, full table size 685 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM665432.CEL.gz |
3.9 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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