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Sample GSM687192 Query DataSets for GSM687192
Status Public on Jun 01, 2011
Title I4 hESCs biological rep 1-2 [mRNA]
Sample type RNA
 
Source name hESCs with SSEA4+
Organism Homo sapiens
Characteristics cell line: I4 hESC line
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Illumina protocol from total RNA.
 
Hybridization protocol Following fragmentation, cRNA were hybridized for Illumina GX ref8 Array. Slides were washed and stained in the Illumina instrument.
Scan protocol Slides were scanned using Illumina BeadArray Reader scanner
Description HK_I4ESC2
Gene expression data from SSEA4+ I4 hESC line
Data processing The data were analyzed with GenomeStudio using Illumina default analysis settings.
 
Submission date Mar 08, 2011
Last update date Jun 01, 2011
Contact name Jeffrey Zhao
Organization name Memorial Sloan Kettering Cancer Center
Department Genomics Core
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6104
Series (1)
GSE27834 miR-371-3 expression predicts neural differentiation potential in human pluripotent stem cells

Data table header descriptions
ID_REF
VALUE normalized signal (AVG)

Data table
ID_REF VALUE
ILMN_1709880 18841.6
ILMN_1656791 30074.7
ILMN_1762168 28307.2
ILMN_1750507 27670
ILMN_1670633 27996.7
ILMN_1810810 28862.8
ILMN_1746516 25730
ILMN_1755883 25155.2
ILMN_1683271 27713.9
ILMN_1789614 21885.9
ILMN_1694742 28573.7
ILMN_1800261 24609.3
ILMN_1787949 26913.4
ILMN_1656082 23943.8
ILMN_1772132 24378.5
ILMN_1690494 26349.8
ILMN_1764721 22267.3
ILMN_1651850 23156.8
ILMN_1710159 24151.6
ILMN_1754195 22305.1

Total number of rows: 22177

Table truncated, full table size 399 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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