NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM687210 Query DataSets for GSM687210
Status Public on Jun 01, 2011
Title H9 hESCs biological rep 3 [miRNA]
Sample type RNA
 
Source name hESCs with SSEA4+
Organism Homo sapiens
Characteristics gender: female
cell line: H9 hESC line
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol miRNA were prepared according to the standard Agilent protocol from 100ng total RNA.
 
Hybridization protocol miRNA were hybridized for 20 hr at 55C on Agilent Human microRNA Array.Slides were washed and stained in the Agilent recommended protocol.
Scan protocol Slides were scanned using the Agilent Scanner.
Description HK_H9-3
miRNA expression data from SSEA4+ H9 hESC line
Data processing The data were analyzed with Feature extraction using Agilent default analysis settings.
 
Submission date Mar 08, 2011
Last update date Jun 01, 2011
Contact name Jeffrey Zhao
Organization name Memorial Sloan Kettering Cancer Center
Department Genomics Core
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6955
Series (1)
GSE27834 miR-371-3 expression predicts neural differentiation potential in human pluripotent stem cells

Data table header descriptions
ID_REF
VALUE processed Cy3 signal intensity (Agilent gProcessedSignal)

Data table
ID_REF VALUE
1 1.193586e+003
2 8.464589e+000
3 3.056637e+000
4 1.645816e+001
5 7.043756e+000
6 1.040528e+002
7 3.290433e+000
8 6.231307e+000
10 -3.556843e-001
11 9.504607e+001
12 1.271001e+000
14 2.807230e+001
17 -5.156347e+000
19 1.062133e+001
20 2.954647e+000
22 3.323743e+001
23 1.631563e+000
26 1.685218e+000
27 9.168219e-001
28 4.028082e+001

Total number of rows: 12033

Table truncated, full table size 230 Kbytes.




Supplementary file Size Download File type/resource
GSM687210_US45103030_251643610573_S01_miRNA-v1_95_May07_1_3.txt.gz 1.5 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap