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Sample GSM71368 Query DataSets for GSM71368
Status Public on Aug 24, 2005
Title Liver_Control _Rep2
Sample type RNA
 
Source name Control rat liver, snap frozen
Organism Rattus norvegicus
Characteristics Strain: Fischer 344
Gender: Male
Age: 6
Tissue: Liver of vehicle treated rat
Biomaterial provider Fischer 344 rats purchased from Harlan, Inc, IN
Treatment protocol gavage with 0.2 ml vehicle (saturated sucrose);
Growth protocol Rat AIN 76A chow (Harlan Teklad, WI)
Extracted molecule total RNA
Extraction protocol Total RNA extraction kit: Stat-60 (Tel-Test Inc, TX)
Label Affymetrix Standard Protocl
Label protocol Affymetrix Standard Protocol
 
Hybridization protocol Affymetrix Standard Protocol
Scan protocol Affymetrix Standard Protocol
Description No
Data processing Normalized with MAS5 across the 8 samples in this project; All probe sets included; No log transformation
 
Submission date Aug 22, 2005
Last update date Aug 22, 2005
Contact name Yong Huang
E-mail(s) [email protected]
Phone (434) 243-0842
Organization name University of Viginia
Department Medicine
Street address 1340 Jefferson Park Ave
City Charlottesville
State/province VA
ZIP/Postal code 22908
Country USA
 
Platform ID GPL85
Series (1)
GSE3173 Identification of novel transcriptional networks in response to the treatment D3T (3H-1, 2-dithiole-3-thione)

Data table header descriptions
ID_REF
VALUE intensities measurement normalized with MAS5
ABS_CALL Present or Absent or Marginal calls determined by Affymetrix GCOS v1.2

Data table
ID_REF VALUE ABS_CALL
A01157cds_s_at 67.8 A
A03913cds_s_at 36.8 A
A04674cds_s_at 17.1 A
A07543cds_s_at 115.8 A
A09811cds_s_at 19.4 A
A16585cds_s_at 102 A
A17753cds_s_at 10.9 A
A30543cds_s_at 12.1 A
A44407cds_at 15.6 A
AA108277_at 31.8 A
AA108308_i_at 2.6 A
AA108308_s_at 227.1 A
AA684537_at 367.3 P
AA684929_f_at 279.5 A
AA684960_f_at 303.8 A
AA684963_at 1072 P
AA685112_at 744.3 P
AA685152_r_at 65 A
AA685376_f_at 47.7 A
AA685876_at 344.6 A

Total number of rows: 8799

Table truncated, full table size 177 Kbytes.




Supplementary data files not provided

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