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Sample GSM729654 Query DataSets for GSM729654
Status Public on May 23, 2012
Title C17_Normal
Sample type genomic
 
Source name surrounding healthy tissue
Organism Homo sapiens
Characteristics disease status: colorectal carcinoma patient
tissue: colon tissue
tissue type: surrounding healthy colonic mucosa
Extracted molecule genomic DNA
Extraction protocol Qiagen Puregene Core kit
Label Cy5 and Cy3
Label protocol Illumina
 
Hybridization protocol Illumina
Scan protocol Illumina
Data processing Illumina BeadStudio
 
Submission date May 23, 2011
Last update date May 23, 2012
Contact name Muhammad Ghulam Kibriya
E-mail(s) [email protected]
Organization name The University of Chicago
Department Health Studies
Street address 900 E 57th Street
City Chicago
ZIP/Postal code 60637
Country USA
 
Platform ID GPL8490
Series (1)
GSE29490 A Genome-wide DNA Methylation Study in Colorectal Carcinoma

Data table header descriptions
ID_REF
VALUE normalized Average Beta value
C17_N.Detection Pval

Data table
ID_REF VALUE C17_N.Detection Pval
cg00000292 0.7229739 3.68E-38
cg00002426 0.6460455 3.68E-38
cg00003994 0.01161578 3.68E-38
cg00005847 0.6444172 3.68E-38
cg00006414 0.02145199 3.68E-38
cg00007981 0.02831976 3.68E-38
cg00008493 0.9868674 3.68E-38
cg00008713 0.0122447 3.68E-38
cg00009407 0.006313168 3.68E-38
cg00010193 0.7039158 3.68E-38
cg00011459 0.9309185 3.68E-38
cg00012199 0.007528242 3.68E-38
cg00012386 0.01503765 3.68E-38
cg00012792 0.005614961 3.68E-38
cg00013618 0.7374107 3.68E-38
cg00014085 0.02661929 3.68E-38
cg00014837 0.8923646 3.68E-38
cg00015770 0.1837397 3.68E-38
cg00016968 0.758428 3.68E-38
cg00019495 0.2444754 3.68E-38

Total number of rows: 27578

Table truncated, full table size 819 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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