NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM73000 Query DataSets for GSM73000
Status Public on Sep 12, 2005
Title Brain_Aged_LPSip_4hr_mouse1 (OL1_#67)
Sample type RNA
 
Source name Mouse brain, Aged, 4hr post LPS ip injection
Organism Mus musculus
Characteristics Strain: In-house BALB/c mice; Gender: Male; Age: 22 months old; Tissue: Brain; Treatment: 4 hours post LPS 0.33mg/kg BW ip.
Extracted molecule total RNA
Label Biotin-labeled
 
Description The aged mouse was injected intraperitoneal (ip) with Escherichia coli lipopolysaccharide (LPS, 0.33mg/kg body weight (BW), ~10ug/mouse; serotype O127:B8, Sigma) and was killed 4 hours after injection by CO2 asphyxiation. Brain was removed, separated in half at the longitudinal fissure, frozen in liquid nitrogen and stored at -80C until use.
Data processing Scaling was used: All probe sets, target signal 150. Data parameters: Alpha1 (0.05), Alpha2 (0.065), Tau (0.015), Gamma1L (0.002), Gamma1H (0.002), Gamma2L (0.002667), Gamma2H (0.002667), Perturbation (1.1). Algorithm: Statistical, GCOS 1.1.
 
Submission date Aug 31, 2005
Last update date Sep 07, 2005
Contact name Rodney W. Johnson
E-mail(s) [email protected], [email protected], [email protected]
Phone 217-333-2118
Fax 217-333-8286
Organization name Univ of Illinois in Urbana
Department Animal Sciences
Lab Dr. Rodney Johnson's lab
Street address 1207 W. Gregory Dr.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platform ID GPL1261
Series (1)
GSE3253 Exaggerated neuroinflammation and sickness behavior in aged mice after activation of the peripheral innate immune system

Data table header descriptions
ID_REF
VALUE Scaled signal count data
ABS_CALL The transcript is detected (Present), not detected (Absent) and marginally detected (Marginal)

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 265.2 P
AFFX-BioB-M_at 532.2 P
AFFX-BioB-3_at 295.6 P
AFFX-BioC-5_at 654.2 P
AFFX-BioC-3_at 649.1 P
AFFX-BioDn-5_at 799.4 P
AFFX-BioDn-3_at 3017.7 P
AFFX-CreX-5_at 7625.9 P
AFFX-CreX-3_at 10180.3 P
AFFX-DapX-5_at 0.4 A
AFFX-DapX-M_at 7.5 A
AFFX-DapX-3_at 1.4 A
AFFX-LysX-5_at 16.5 A
AFFX-LysX-M_at 20.6 A
AFFX-LysX-3_at 25 A
AFFX-PheX-5_at 2.4 A
AFFX-PheX-M_at 2.2 A
AFFX-PheX-3_at 23.8 A
AFFX-ThrX-5_at 2.4 A
AFFX-ThrX-M_at 1.6 A

Total number of rows: 45101

Table truncated, full table size 808 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap