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Sample GSM744658 Query DataSets for GSM744658
Status Public on Jan 15, 2014
Title P3P3-2
Sample type RNA
 
Source name Adult LHM, whole fly
Organism Drosophila melanogaster
Characteristics Sex: F
female.type: Prom
female.pop: Prom3
male.type: Prom
female.pop: Prom3
interaction: P.P
label: P3P3
batch: 2
Extracted molecule total RNA
Extraction protocol Trizol (Invitrogen) extraction and RNeasy (Qiagen) purification
Label biotin
Label protocol Affymetrix GeneChip IVT Labeling Kit, standard manufacturer's protocol
 
Hybridization protocol Affymetrix Eukaryotic Target Hybridization protocol
Scan protocol Affymetrix GeneChip Scanner 3000 with GCOS software
Description PA078_P3P3-2_100303_(Drosophila_2).CEL
Data processing Probesets pre-processed with RMA, as implemented in R/Bioconductor package affy. Data are log2 transformed.
 
Submission date Jun 20, 2011
Last update date Jan 15, 2014
Contact name Paolo Innocenti
E-mail(s) [email protected]
Organization name Uppsala university
Department Dept. of Animal Ecology
Lab Morrow Lab
Street address Norbyvägen 18D
City Uppsala
ZIP/Postal code 75236
Country Sweden
 
Platform ID GPL1322
Series (1)
GSE30089 Post-mating expression of female D. melanogaster genomes experimentally evolved under different post-copulatory sexual selection regimes

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
1616608_a_at 11.91037445
1622892_s_at 8.659655743
1622893_at 10.53390029
1622894_at 6.428547151
1622895_at 9.286450596
1622896_at 6.953373499
1622897_at 5.480384707
1622898_a_at 10.22390507
1622899_at 4.764970777
1622900_at 3.377066401
1622901_at 4.966804744
1622902_at 7.452306733
1622903_s_at 9.165724838
1622904_at 4.345312564
1622905_at 3.156980857
1622906_at 7.803607859
1622907_at 8.272250271
1622908_a_at 7.538721996
1622909_at 10.80064245
1622910_at 3.631066289

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM744658.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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