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Sample GSM754514 Query DataSets for GSM754514
Status Public on Jul 07, 2011
Title blood 0.5g T1 ppC
Sample type RNA
 
Source name blood 0.5g T1 ppC
Organism Homo sapiens
Characteristics donor: C
Sex: M
tissue: blood
treatment: 0.5g APAP exposure
time: 1h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 0.5g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) [email protected]
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 88.99371812
10_at 21.1279036
100_at 495.6639925
1000_at 36.71342603
10000_at 20.55634911
10001_at 262.3785127
10002_at 20.32173899
10003_at 8.293703406
10004_at 150.0339549
100048912_at 12.09304374
100049716_at 138.3012871
10005_at 273.4934306
10006_at 581.7801882
10007_at 346.5000516
10008_at 566.8324737
10009_at 147.8564645
100093630_at 125.741693
1001_at 23.0145062
10010_at 279.7056369
100101467_at 70.04166511

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754514_ppC_0.5g_t1_HG-U133_Plus_2_.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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