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Sample GSM754553 Query DataSets for GSM754553
Status Public on Jul 07, 2011
Title blood 2g T25 ppF
Sample type RNA
 
Source name blood 2g T25 ppF
Organism Homo sapiens
Characteristics donor: F
Sex: F
tissue: blood
treatment: 2g APAP exposure
time: 25h
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the PAXgene Blood RNA kit (PreAnalytiX/Qiagen) according to the manufacturers protocol (including Dnase) and was globin reduced using the GLOBINclear kit (Ambion) according to the manufacturers protocol
Label biotin
Label protocol We used standard Affymetrix labeling protocols
 
Hybridization protocol We used standard Affymetrix hybridisation rotocols
Scan protocol We used standard Affymetrix scanning parameters
Description globin reduced total RNA
sample 2g APAP exposure
Data processing All samples were normalized by RMA algorithm and analyzed by SAM (FC>1.5 and FDR<10%).
 
Submission date Jul 05, 2011
Last update date Jul 07, 2011
Contact name marlon jetten
E-mail(s) [email protected]
Organization name maastricht university
Street address universiteitssingel 50
City Maastricht
ZIP/Postal code 6200MD
Country Netherlands
 
Platform ID GPL10526
Series (1)
GSE30418 Low dose human APAP exposure

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1_at 29.30898486
10_at 11.5910898
100_at 254.8386623
1000_at 20.76473456
10000_at 13.40157501
10001_at 154.5319327
10002_at 11.39521322
10003_at 5.784193625
10004_at 63.12916839
100048912_at 11.69576507
100049716_at 59.61705833
10005_at 177.167228
10006_at 498.9755611
10007_at 261.374154
10008_at 362.1858357
10009_at 115.4557831
100093630_at 102.2896489
1001_at 15.07661911
10010_at 217.9154052
100101467_at 57.8932339

Total number of rows: 17788

Table truncated, full table size 361 Kbytes.




Supplementary file Size Download File type/resource
GSM754553_ppF_t25_HG-U133_plus_2_.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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