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GEO accession:
Sample GSM76203
Query DataSets for GSM76203
Status
Public on Mar 31, 2006
Title
B-020-JJN3+SCRAMBLE+poly
Sample type
RNA
Source name
Human myeloma cell line
Organism
Homo sapiens
Characteristics
Human myeloma cell line JJN3
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
JJN3 with non-specific scrambled shRNA
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Sep 30, 2005
Last update date
Nov 30, 2005
Contact name
Shaughnessy Jr. John
E-mail(s)
[email protected]
Phone
(501)296-1503 1410
Organization name
Myeloma Institute for Research and Therapy
Department
Lab
Donna D. and Donald M. Lambert Laboratory of Myeloma Genetics
Street address
4301 West Markham St., Slot 776
City
Little Rock
State/province
AR
ZIP/Postal code
72205
Country
USA
Platform ID
GPL570
Series (1)
GSE3369
Affymetrix U133Plus2.0 data sets of Human Myeloma Cellline JJN3 with non-specific, scrambled shRNA or CKS1B shRNA
Data table header descriptions
ID_REF
probset name
VALUE
A quantitative measure of the relative abundance of a transcript
ABS_CALL
A qualitative measurement indicating if a given transcript is detected (Present), not detected (Absent), or marginally detected (Marginal)
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
294
P
AFFX-BioB-M_at
353.3
P
AFFX-BioB-3_at
182.7
P
AFFX-BioC-5_at
602.6
P
AFFX-BioC-3_at
737.9
P
AFFX-BioDn-5_at
1306.7
P
AFFX-BioDn-3_at
4362.9
P
AFFX-CreX-5_at
8846.9
P
AFFX-CreX-3_at
11181.7
P
AFFX-DapX-5_at
52.5
M
AFFX-DapX-M_at
17.4
A
AFFX-DapX-3_at
6.4
A
AFFX-LysX-5_at
3.8
A
AFFX-LysX-M_at
30.8
A
AFFX-LysX-3_at
2
A
AFFX-PheX-5_at
7
A
AFFX-PheX-M_at
3.9
A
AFFX-PheX-3_at
58.5
A
AFFX-ThrX-5_at
12.9
A
AFFX-ThrX-M_at
7.6
A
Total number of rows:
54675
Table truncated, full table size
975 Kbytes
.
Supplementary data files not provided
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