NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM797445 Query DataSets for GSM797445
Status Public on Sep 16, 2011
Title Alternative activated macrophages (M2) rep 2
Sample type RNA
 
Source name Alternative activated macrophages (M2)
Organism Homo sapiens
Characteristics source tissue: normal donor buffy coats
source cell type: freshly isolated monocytes
cell type: macrophages
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cDNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
 
Hybridization protocol Following fragmentation, 2.7 ug of cDNA were hybridized for 16 hr at 45C on Human Genome HuGene 1.0 ST . GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned were scanned using the Affymetrix GeneChip Scanner 3000.
Description Donor_2 M2_rep2
R743_N5
Data processing Expression dataset was obtained by means of Partek software version 6.3, with RMA method.
 
Submission date Sep 15, 2011
Last update date Sep 01, 2016
Contact name Massimo Locati
E-mail(s) [email protected]
Phone +39 02 8224 5116
Fax 02-82245101
URL http://www.humanitas.it/hur/cms/english/activities/lab/leukocyte_biology/groupleader.html
Organization name Istituto Clinico Humanitas
Department Department of Translational Medicine of the University of Milan Faculty of Medicine, IRCCS Istituto Clinico Humanitas
Lab Laboratory of Leukocyte Biology
Street address Via Manzoni, 113
City Rozzano
State/province MILAN
ZIP/Postal code 20089
Country Italy
 
Platform ID GPL6244
Series (1)
GSE32164 Expression data from macrophage maturation and polarization c-Myc in alternative macrophage activation experiments
Relations
Reanalyzed by GSE86357

Data table header descriptions
ID_REF
VALUE RMA normalized

Data table
ID_REF VALUE
7892501 5.45186
7892502 3.406
7892503 2.55127
7892504 9.26211
7892505 2.3126
7892506 2.98723
7892507 2.23783
7892508 3.75464
7892509 11.6647
7892510 3.51579
7892511 2.67201
7892512 6.199
7892513 3.04944
7892514 10.3208
7892515 8.33741
7892516 6.10302
7892517 4.19832
7892518 1.8968
7892519 2.90477
7892520 8.30243

Total number of rows: 33297

Table truncated, full table size 516 Kbytes.




Supplementary file Size Download File type/resource
GSM797445_R743_N5_HuGene-1_0-st-v1_.CEL.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap