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Sample GSM802936 Query DataSets for GSM802936
Status Public on Jun 30, 2012
Title Cardiac septum_HCM (4158307036_D)
Sample type RNA
 
Source name Cardiac septum_HCM
Organism Homo sapiens
Characteristics gender: female
disease state: HCM
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307036_D
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) [email protected]
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307036_D.Detection Pval
4158307036_D.BEAD_STDERR
4158307036_D.Avg_NBEADS

Data table
ID_REF VALUE 4158307036_D.Detection Pval 4158307036_D.BEAD_STDERR 4158307036_D.Avg_NBEADS
ILMN_1809034 46.77328 0.01412429 9.948832 40
ILMN_1660305 214.6936 0.001412429 15.10303 43
ILMN_1792173 212.5035 0.001412429 18.72655 42
ILMN_1762337 1.569126 0.3432204 7.108309 27
ILMN_1736007 -3.276003 0.5579096 6.14314 37
ILMN_1787689 24.51681 0.04519774 7.784316 35
ILMN_1731507 56.36342 0.01412429 10.15932 30
ILMN_1814316 364.6346 0 23.97109 48
ILMN_1745607 7268.439 0 272.6224 45
ILMN_1757454 -4.687273 0.6313559 6.236331 32
ILMN_1735045 775.7103 0 30.94485 51
ILMN_1680754 27.6766 0.03672316 8.840299 39
ILMN_1659452 3.990992 0.2612994 6.115743 48
ILMN_1767388 50.06934 0.01412429 8.827729 46
ILMN_1673870 -3.33891 0.5649717 5.349692 38
ILMN_1675204 -2.582054 0.529661 6.368274 35
ILMN_1755321 76.29537 0.008474576 10.98415 42
ILMN_1698554 191.4315 0.001412429 17.84532 33
ILMN_1805938 -5.642492 0.6878531 3.861259 47
ILMN_1676336 1062.474 0 53.40392 46

Total number of rows: 22184

Table truncated, full table size 925 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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