|
| Status |
Public on Jul 01, 2013 |
| Title |
Pt25_Pre |
| Sample type |
RNA |
| |
|
| Source name |
Tumor
|
| Organism |
Homo sapiens |
| Characteristics |
timepoint: Pre-Cediranib treatment
|
| Extracted molecule |
total RNA |
| Extraction protocol |
standard Affymetrix protocol
|
| Label |
biotin
|
| Label protocol |
Affymetrix GeneChip 3’ IVT Express Labeling Kit, manufacturer's protocol
|
| |
|
| Hybridization protocol |
Hybridization, staining, and scanning were performed in quadruplicate using the GeneChip Human Genome U133 Plus 2.0 Array (Affymetrix)
|
| Scan protocol |
Affymetrix GeneChip Scanner 3000 according to the manufacturer’s protocol
|
| Data processing |
Probe set summarization and normalization was performed by robust multi-array averaging (RMA, including background subtraction, summarization by median polish and quantile normalization) using the R/Bioconductor package affy.
|
| |
|
| Submission date |
Oct 03, 2011 |
| Last update date |
Jul 01, 2013 |
| Contact name |
Eric C Polley |
| E-mail(s) |
[email protected]
|
| Organization name |
National Cancer Institute
|
| Department |
Biometric Research Branch
|
| Street address |
9609 Medical Center Drive, Rm 5W118
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE32569 |
Expression data for Cediranib in Metastatic ASPS |
|
