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Sample GSM862619 Query DataSets for GSM862619
Status Public on Dec 31, 2014
Title control #1
Sample type RNA
 
Source name mouse dorsal root ganglion, control
Organism Mus musculus
Characteristics strain: C57/BL6;129Ola mixed
genotype: wildtype
age: 15 days
tissue: dorsal root ganglion
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up with the QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion Illumina TotalPrep RNA Amplif Kit.
 
Hybridization protocol Standard Illumina hybridization protocol.
Scan protocol Standard Illumina scanning protocol.
Description 4936640004_B
Replicate 1 of 6.
Data processing The data were normalized using quantile normalization with Illumina Genome Studio.
 
Submission date Jan 17, 2012
Last update date Dec 31, 2014
Contact name Hagen Wende
Organization name Heidelberg University
Department Institute of Pharmacology
Lab Siemens
Street address Im Neuenheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL6885
Series (1)
GSE35148 Genome-wide analysis of P15 dorsal root ganglion gene expression of control and Isl1-Cre//c-Maf mutant mice

Data table header descriptions
ID_REF
VALUE Quantile-normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 43.94029 0.00877193
ILMN_2707227 15.59255 0.1015038
ILMN_2896528 3056.473 0
ILMN_2721178 581.8447 0
ILMN_1227723 309.2713 0
ILMN_3033922 508.415 0
ILMN_3092673 2904.066 0
ILMN_2730714 4890.47 0
ILMN_3162224 1464.25 0
ILMN_2816356 11.8656 0.1453634
ILMN_2808939 459.6747 0
ILMN_2634564 297.6689 0
ILMN_1216623 486.511 0
ILMN_1215157 772.8409 0
ILMN_1228777 0.6968225 0.3784461
ILMN_2737647 0.7152544 0.3784461
ILMN_1216425 -5.324586 0.6315789
ILMN_2734484 771.7074 0
ILMN_2652961 -7.933055 0.735589
ILMN_2952292 141.8192 0

Total number of rows: 25697

Table truncated, full table size 733 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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