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Sample GSM864248 Query DataSets for GSM864248
Status Public on Apr 01, 2012
Title Induced pluripotent cells [iPS_II1]
Sample type RNA
 
Source name iPSC for patient II-1
Organism Homo sapiens
Characteristics cell type: iPS cells
disease state: Hypertrophic cardiomyopathy
Growth protocol Matrigel coated culture dishes and mTeSR
Extracted molecule total RNA
Extraction protocol Extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization were followed standard Affymetrix protocol in Affymetrix GeneChip Hybridization Oven 640
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G
Description Gene expression data from iPSC
Data processing The data were analyzed with Affymetrix Expression Console using Affymetrix default analysis settings and RMA as normalization method.
 
Submission date Jan 20, 2012
Last update date Apr 01, 2012
Contact name Leng Han
E-mail(s) [email protected]
Organization name Stanford University
Street address 265 Campus Dr
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL6244
Series (1)
GSE35229 Expression data from patient iPSC

Data table header descriptions
ID_REF
VALUE log2 RMA

Data table
ID_REF VALUE
7892501 7.966859
7892502 5.933303
7892503 4.017622
7892504 9.936252
7892505 4.51252
7892506 6.028126
7892507 7.287971
7892508 8.060714
7892509 13.11154
7892510 5.196477
7892511 5.213616
7892512 8.194317
7892513 4.218517
7892514 12.08189
7892515 11.20738
7892516 5.200733
7892517 6.561234
7892518 5.275798
7892519 7.258658
7892520 10.09309

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM864248_iPS-II-1.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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