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Sample GSM91617 Query DataSets for GSM91617
Status Public on Jan 11, 2006
Title wildtype-legdisc-rep1
Sample type RNA
 
Source name third instar leg discs
Organism Drosophila melanogaster
Characteristics Third instar wild type leg discs
Extracted molecule total RNA
Extraction protocol Trizol total RNA
Label biotin
Label protocol cDNA synthesis was carried out as described in the Expression Analysis Technical Manual (Affymetrix, two-cycle protocol) using 100 ng of total RNA for each sample. The cRNA reactions were carried out using the BioArray High-Yield Transcript Labeling kit (Enzo).
 
Hybridization protocol Fifteen micrograms of labeled cRNA was fragmented and sequentially hybridized to the Affymetrix Drosophila Genome Array 2 following the manufacturer’s instructions.
Scan protocol Standard Affymetrix protocol.
Description Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless
Data processing dChip
 
Submission date Jan 10, 2006
Last update date Mar 12, 2007
Contact name rui chen
E-mail(s) [email protected]
Phone 7137985194
Organization name Baylor College of Medicine
Department HGSC, Department of Molecular and Human Gentics
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL1322
Series (1)
GSE4008 Genome-Wide Identification of Direct Targets of the Drosophila Retinal Determination Protein Eyeless

Data table header descriptions
ID_REF
VALUE probe set value

Data table
ID_REF VALUE
AFFX-BioB-5_at 8.23208
AFFX-BioB-M_at 8.28068
AFFX-BioB-3_at 8.4115
AFFX-BioC-5_at 9.0033
AFFX-BioC-3_at 8.66927
AFFX-BioDn-5_at 9.72056
AFFX-BioDn-3_at 11.4018
AFFX-CreX-5_at 12.5555
AFFX-CreX-3_at 12.9948
AFFX-DapX-5_at 7.86207
AFFX-DapX-M_at 10.1414
AFFX-DapX-3_at 11.2539
AFFX-LysX-5_at 6.91296
AFFX-LysX-M_at 7.97678
AFFX-LysX-3_at 9.21619
AFFX-PheX-5_at 7.70774
AFFX-PheX-M_at 8.38378
AFFX-PheX-3_at 9.15351
AFFX-ThrX-5_at 7.36376
AFFX-ThrX-M_at 7.94825

Total number of rows: 18952

Table truncated, full table size 358 Kbytes.




Supplementary data files not provided

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