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Sample GSM9183 Query DataSets for GSM9183
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 2
Sample type RNA
 
Channel 1
Source name Hypothyroid cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name T3 treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effecet of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes

Comparison of hypothyroid and T3 treated cells. Hypothyroid represents channel 1 and T3 is channel 2. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 19, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 476.4301 55.37897 390.3261 21.742521 684.3592 36.68112 636.0978 18.5513 -8.30E-02
10 680.1035 59.386982 384.9681 26.500622 703.654 27.55844 629.6157 19.20504 1.13E+00
12 458.7533 56.051457 391.6267 28.5043 668.7553 32.52495 633.3741 22.61035 -1.88E-02
21 423.4933 28.743019 375.7076 18.779611 664.9382 23.90286 632.4201 19.05129 -3.72E-01
22 428.0065 22.871683 406.951 17.968775 638.9956 19.2874 631.7627 18.73741 9.53E-02
28 410.6011 23.805693 702.1926 937.153456 643.613 18.00192 671.7643 92.73719 1.21E-02
31 4658.6507 2225.51477 1441.0759 2127.433022 2767.4875 1183.06539 727.5304 183.04158 -1.51E-01
42 1864.1158 806.80841 533.8605 274.564842 1345.2994 367.68755 662.8294 71.67116 1.01E-01
44 392.3262 33.798376 368.5299 19.782035 645.9385 33.51649 624.7017 18.66872 -2.68E-01
47 529.2017 72.613674 370.1162 21.187343 761.6383 68.92775 627.3385 21.30611 -6.42E-01
57 430.0868 19.320853 416.7388 24.797482 629.8787 17.88508 629.7868 18.72014 4.74E-02
58 290.1386 18.971332 273.2784 15.929149 622.8918 21.32941 610.0364 19.05394 -2.58E-02
59 253.8833 19.374608 234.4753 20.509184 638.8312 20.6912 625.43 21.47768 2.17E-02
60 375.1308 135.852478 236.4588 48.570288 716.1427 112.79403 608.2411 41.47013 -5.14E-01
69 2712.4124 1178.851237 242.376 62.80532 2530.6357 980.79696 615.1369 38.07125 -5.54E-01
73 254.1704 40.091834 202.4989 16.136481 680.6581 64.37875 602.5825 25.07286 -1.42E+00
80 2239.6225 663.708008 487.2679 636.319623 1314.077 178.21567 667.6792 170.16487 1.02E-01
84 266.8421 13.490635 265.1068 18.605285 605.4636 17.75089 608.1833 19.10417 6.06E-03
93 338.2865 85.049184 220.0057 22.523603 652.8312 40.11588 612.0624 20.4839 3.99E-01
98 433.604 107.031222 230.0527 25.387557 710.1078 60.21576 604.5439 22.48822 6.79E-02

Total number of rows: 4273

Table truncated, full table size 370 Kbytes.




Supplementary data files not provided
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