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Sample GSM9186 Query DataSets for GSM9186
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 5
Sample type RNA
 
Channel 1
Source name T3 treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name DITPA treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effect of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes.

Comparison of T3 and DITPA treated cells. T3 represents channel 1 and DITPA is channel 2. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 20, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 429.0784 21.45957 389.6365 17.52832 634.7286 17.09856 622.1658 17.69273 3.45E-01
10 536.5902 31.5916 385.0097 14.96432 683.2066 22.06487 625.2711 18.72677 -1.26E-01
12 780.6252 1389.90728 397.2838 38.01732 655.919 65.31839 627.4904 17.99861 1.41E+00
21 488.4355 21.33921 433.478 16.41795 647.1881 16.48321 634.9408 17.41293 6.17E-01
22 525.3245 27.75964 493.2545 18.31309 654.3608 18.64446 649.0078 18.82724 1.57E-01
28 439.6182 20.11738 435.9012 19.52414 628.1311 17.89856 627.7322 17.7122 5.19E-02
31 2359.4657 888.19753 396.1158 54.9679 1455.112 393.03004 625.0841 24.66235 -6.45E-02
42 1253.7737 300.08679 387.2706 23.4456 1011.0207 143.90397 624.1065 17.37484 -3.02E-01
44 418.2121 28.41021 393.2505 15.59161 636.3346 19.59746 627.1935 17.50132 2.24E-01
47 563.5463 32.62197 435.4896 16.11898 697.0935 24.48693 634.3814 18.59262 -5.91E-01
57 502.8604 14.94601 501.7443 16.98999 642.8702 18.05247 645.6873 17.53401 1.15E-01
58 414.7943 19.82164 389.0759 18.10049 629.4952 18.85102 621.7531 19.06037 2.42E-02
59 358.258 17.77222 335.334 15.3942 616.4798 17.95155 611.5899 17.97565 8.06E-02
60 506.7007 100.05457 323.1072 35.14269 691.6313 43.8174 616.6701 22.67559 -1.89E-01
69 3686.3217 518.32975 349.015 214.37183 1466.4818 159.78222 628.1175 64.69344 5.44E-01
73 335.0263 24.37315 324.808 16.10833 629.9371 17.92243 624.1779 17.6959 1.18E-01
80 1108.6016 143.41298 418.3776 103.61938 906.2118 51.45801 645.5948 41.86239 -3.94E-01
84 375.5211 14.73946 371.9328 14.78116 617.689 17.6303 615.1459 17.66978 1.86E-02
93 403.489 78.55044 329.5886 18.03678 627.7743 24.32781 611.0026 19.05558 5.40E-01
98 443.217 75.1805 319.2789 21.20767 651.8671 30.57917 615.5941 18.64598 3.38E-01

Total number of rows: 4273

Table truncated, full table size 361 Kbytes.




Supplementary data files not provided
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