NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9187 Query DataSets for GSM9187
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 6
Sample type RNA
 
Channel 1
Source name DITPA treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name T3 treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effect of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes.

Comparison of T3 and DITPA treated cells. DITPA represents channel 1 and T3 is channel 2. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 20, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 185.9207 12.073126 176.2024 40.944166 674.2014 24.9894 659.0032 23.95384 4.72E-01
10 133.6302 8.815357 118.385 23.502262 697.0824 25.37931 644.3261 24.47079 -1.32E-02
12 127.7568 8.398146 120.6948 7.301754 677.6585 22.65844 648.9228 18.79457 -4.63E-01
21 137.7757 9.66522 126.5184 8.180256 658.4847 21.25487 638.5068 20.41479 5.23E-01
22 134.0226 8.871691 125.3403 7.850651 665.84 19.85515 656.869 21.85087 2.95E-01
28 147.5289 10.624205 149.021 90.340015 648.0055 21.08514 651.5174 42.98934 -8.36E-03
31 815.9592 140.370468 324.7256 60.396595 2483.6217 550.50277 707.1793 43.22348 1.08E-01
42 226.7236 32.32821 118.3078 7.475155 1115.8289 143.24064 644.5834 19.21668 -1.43E-01
44 130.7541 8.966837 121.5959 7.562978 668.8202 25.90014 647.4192 20.05532 5.52E-02
47 139.8596 10.098885 121.8464 7.680159 709.3078 47.32627 628.0623 21.75664 -4.83E-01
57 136.187 10.852044 150.4267 538.514442 667.4499 22.16578 664.6215 34.10745 1.50E-01
58 114.937 12.414226 114.3058 128.199932 635.3836 22.4719 626.5575 24.05371 3.69E-02
59 115.0767 8.143679 119.1571 184.709865 630.7893 21.59497 619.1287 24.14354 6.22E-02
60 137.8288 23.611621 119.9938 9.414254 703.2864 79.71074 636.6438 31.95225 -2.98E-01
69 391.1599 59.932388 134.5245 33.024911 2010.6611 312.75412 666.038 173.12321 -5.84E-01
73 139.8404 10.174418 129.5771 7.689206 679.8634 32.86296 641.4364 21.25083 -2.02E-01
80 216.0397 25.953253 160.9329 17.507857 908.755 120.97752 657.9991 53.38857 -6.10E-01
84 108.7845 8.450591 107.8713 30.505803 621.8762 18.96276 620.5689 23.97604 -1.43E-02
93 120.324 11.553447 111.504 25.164975 648.0829 37.12427 622.419 20.2077 -6.50E-02
98 134.6558 11.259478 120.5089 7.715249 688.6298 42.05707 632.8991 18.86063 -2.31E-01

Total number of rows: 4273

Table truncated, full table size 364 Kbytes.




Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap