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Sample GSM9191 Query DataSets for GSM9191
Status Public on Aug 23, 2003
Title Thyroid hormone effect on cardiomyocytes; Sample 10
Sample type RNA
 
Channel 1
Source name CGS treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
Channel 2
Source name T3 treated cardiomyocytes
Organism Rattus norvegicus
Extracted molecule total RNA
 
 
Description Effect of thyroid hormone (T3) and its structural analogues like DITPA and CGS on primary culture of cardiomyocytes.

Comparison of CGS and T3 treated cell. CGS represents channel 1 and T3 is channel 2. Each gene (oligo) was spotted in triplicate.
 
Submission date Aug 20, 2003
Last update date May 27, 2005
Contact name Niranjan Maitra
E-mail(s) [email protected]
Phone 520-626-4966
Fax 520-626-8408
Organization name University of Arizona
Department Sarver Heart Center
Lab Eugene Morkin
Street address 1501 North Campbell Avenue
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platform ID GPL333
Series (1)
GSE602 T3,DITPA and CGS

Data table header descriptions
ID_REF
CH1_MEAN channel 1 mean
CH1_SD channel 1 standard deviation
CH1_BKG_MEAN channel 1 background mean
CH1_BKG_SD channel 1 background standard deviation
CH2_MEAN channel 2 mean
CH2_SD channel 2 standard deviation
CH2_BKG_MEAN channel 2 background mean
CH2_BKG_SD channel 2 background standard deviation
VALUE log2 ratio (channel1/channel2)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD VALUE
4 17265.76375 1022.59084 17654.11825 3930.184 4529.07054 365.0284 4504.251 925.8432 1.92E+00
10 978.91846 101.51575 412.372691 48.61311 1014.15853 237.8272 473.3948 200.2456 2.36E-01
12 1265.0815 103.86912 1046.593018 140.12089 1465.51595 206.1852 1263.6453 301.3278 1.18E-02
21 803.84851 100.44124 644.533529 62.92049 817.53115 229.8551 698.088 202.7221 1.28E-01
22 986.52081 280.67949 819.302734 697.9458 915.98322 229.9242 825.0588 482.5131 3.69E-01
28 439.07511 88.34412 349.418447 49.53831 398.09007 185.6382 370.116 190.8442 2.05E-02
31 8437.92871 3350.66561 383.242269 58.407 11549.3405 5184.179 456.8644 235.6323 -2.74E-01
42 4035.77466 1222.24967 439.181325 50.05955 4477.77507 1457.7351 498.2585 194.4293 4.27E-02
44 845.93728 147.26871 725.954895 98.89597 750.56061 244.9002 686.0443 231.9382 1.10E-01
47 1194.44425 112.6636 628.325338 59.51715 1553.18803 307.7005 753.8735 203.2446 -3.09E-01
57 671.17544 121.57048 614.199707 73.76164 801.60089 214.8842 816.0756 199.4435 5.35E-02
58 146.48633 98.51656 72.712884 60.94014 336.16887 214.0365 252.7913 179.4665 1.34E-01
59 337.58134 79.72971 248.096568 47.64939 374.36807 187.4044 329.0294 186.4074 1.35E-01
60 1267.66317 182.51488 477.869019 49.71057 1330.5575 343.4044 455.8885 196.8828 9.42E-02
69 6797.76921 1294.3656 733.582174 68.13897 10124.85872 2353.2815 627.3004 198.6254 -5.21E-01
73 1317.47982 180.0307 983.769043 87.80494 1180.56962 264.0391 742.7483 216.737 -4.53E-01
80 3904.99048 468.97529 1103.204102 58.45038 4899.79362 805.056 900.8809 210.2554 -5.40E-01
84 83.22811 61.92076 63.815853 42.70342 284.13055 176.3513 237.7957 177.9628 5.42E-02
93 844.11346 139.80587 251.529073 45.80061 994.27966 271.6572 338.5513 192.4845 6.28E-02
98 1175.90682 152.89933 505.189952 53.18504 1073.20028 252.2985 442.3403 189.26 3.06E-01

Total number of rows: 4273

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
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