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GEO accession:
Sample GSM92916
Query DataSets for GSM92916
Status
Public on Jan 28, 2006
Title
43227
Sample type
RNA
Source name
Parenchyma of an intact animal treated with corn oil (control)
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
9.5544962780
0.7286861156
BOV00P0000000002
1.9964892057
0.8682628654
BOV00P0000000003
0.5720405351
0.8170089068
BOV00P0000000004
0.9301605524
0.7180168648
BOV00P0000000005
1.0037172563
0.7700452955
BOV00P0000000006
4.0357462523
0.7171557037
BOV00P0000000007
2.2604451105
1.6624930474
BOV00P0000000008
1.1800707036
0.8668919307
BOV00P0000000009
4.5340661578
0.7959627495
BOV00P0000000010
4.7989291800
0.9879641717
BOV00P0000000011
0.4338974093
1.0970986774
BOV00P0000000012
0.9889673171
0.7637867162
BOV00P0000000013
3.5755935506
2.9936053518
BOV00P0000000014
1.1896058450
0.9091169161
BOV00P0000000015
1.9778460846
1.5996351794
BOV00P0000000016
1.5721173490
0.7795689275
BOV00P0000000017
1.1088298029
0.8112685693
BOV00P0000000018
1.6386577337
0.9055793811
BOV00P0000000019
16.4621231809
0.5471811592
BOV00P0000000020
1.0076409228
1.0644158924
Total number of rows:
84649
Table truncated, full table size
3557 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92916.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
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