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GEO accession:
Sample GSM92918
Query DataSets for GSM92918
Status
Public on Jan 28, 2006
Title
43228
Sample type
RNA
Source name
Parenchyma of an OVX animal treated with estrogen
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
7.0761820487
0.5445260963
BOV00P0000000002
1.6611280942
0.7289108011
BOV00P0000000003
1.1341255996
1.6343615707
BOV00P0000000004
1.5444448209
1.2029182838
BOV00P0000000005
1.8082897514
1.3997803857
BOV00P0000000006
9.5381029248
1.7101673506
BOV00P0000000007
0.9283318860
0.6888999313
BOV00P0000000008
2.0948568259
1.5527383504
BOV00P0000000009
6.8755843409
1.2178716088
BOV00P0000000010
6.8103867384
1.4146715861
BOV00P0000000011
0.4703974753
1.2000811613
BOV00P0000000012
1.0450925748
0.8143890491
BOV00P0000000013
1.0803156430
0.9126075717
BOV00P0000000014
0.5735015496
0.4422198641
BOV00P0000000015
1.7066289916
1.3926903790
BOV00P0000000016
1.2235223551
0.6121649647
BOV00P0000000017
4.7173804695
3.4824722675
BOV00P0000000018
6.2947628218
3.5099800370
BOV00P0000000019
47.7833792825
1.6025410016
BOV00P0000000020
2.3307648502
2.4842254969
Total number of rows:
84818
Table truncated, full table size
3564 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92918.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
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