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GEO accession:
Sample GSM92925
Query DataSets for GSM92925
Status
Public on Jan 28, 2006
Title
41761
Sample type
RNA
Source name
Fat pad of an intact animal treated with estrogen
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
20.3362115424
1.4909071466
BOV00P0000000002
2.9978240856
1.2532515543
BOV00P0000000003
0.8762330466
1.2030050818
BOV00P0000000004
2.1094063282
1.5652539879
BOV00P0000000005
1.7009976037
1.2544588786
BOV00P0000000006
8.3358163602
1.4239199993
BOV00P0000000007
1.3686547027
0.9676261859
BOV00P0000000008
1.5420030462
1.0889050452
BOV00P0000000009
7.7040856788
1.3000912684
BOV00P0000000010
7.3334420641
1.4512845316
BOV00P0000000011
0.4168777005
1.0132465781
BOV00P0000000012
1.0808238527
0.8024037111
BOV00P0000000013
0.8303383867
0.6682659973
BOV00P0000000014
1.5957208294
1.1722531547
BOV00P0000000015
0.9362234717
0.7278733630
BOV00P0000000016
2.6935933356
1.2839539143
BOV00P0000000017
1.5045377520
1.0581584309
BOV00P0000000018
1.7104140398
0.9086306306
BOV00P0000000019
43.1582318669
1.3789762255
BOV00P0000000020
0.9282647009
0.9425952258
Total number of rows:
85201
Table truncated, full table size
3581 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92925.CEL.gz
5.6 Mb
(ftp)
(http)
CEL
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