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GEO accession:
Sample GSM92947
Query DataSets for GSM92947
Status
Public on Jan 28, 2006
Title
44526
Sample type
RNA
Source name
Fat pad of an OVX animal treated with estrogen
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
19.0901461583
1.5235246424
BOV00P0000000002
3.1966121939
1.4547278163
BOV00P0000000003
0.5211279098
0.7788464608
BOV00P0000000004
1.0018338866
0.8092449089
BOV00P0000000005
0.7438416651
0.5971630299
BOV00P0000000006
3.6095536569
0.6711979749
BOV00P0000000007
1.2779765944
0.9835496830
BOV00P0000000008
1.4855642798
1.1419731968
BOV00P0000000009
4.5827954439
0.8418658525
BOV00P0000000010
4.3218972265
0.9310624685
BOV00P0000000011
0.3978033613
1.0525303159
BOV00P0000000012
1.7462500831
1.4112505749
BOV00P0000000013
1.1612991275
1.0174147552
BOV00P0000000014
1.1148549320
0.8915435032
BOV00P0000000015
1.1776113662
0.9966392214
BOV00P0000000016
2.1506367370
1.1159484953
BOV00P0000000017
0.6813328719
0.5216348921
BOV00P0000000018
1.0444449078
0.6039922154
BOV00P0000000019
23.1196232072
0.8041435275
BOV00P0000000020
0.7411241204
0.8192265748
Total number of rows:
85222
Table truncated, full table size
3581 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92947.CEL.gz
5.8 Mb
(ftp)
(http)
CEL
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