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GEO accession:
Sample GSM92948
Query DataSets for GSM92948
Status
Public on Jan 28, 2006
Title
47465
Sample type
RNA
Source name
Fat pad of an OVX animal treated with estrogen
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
22.9114486756
1.7219074463
BOV00P0000000002
2.3696536779
1.0155321913
BOV00P0000000003
0.6908800862
0.9723602949
BOV00P0000000004
0.9423055612
0.7167918139
BOV00P0000000005
1.2989647188
0.9820346043
BOV00P0000000006
7.1471553208
1.2515476234
BOV00P0000000007
1.0208172152
0.7398410296
BOV00P0000000008
1.0596914050
0.7671157482
BOV00P0000000009
5.4248115717
0.9384564067
BOV00P0000000010
5.3472528400
1.0848061263
BOV00P0000000011
0.4623001623
1.1518799936
BOV00P0000000012
0.9437290179
0.7182274927
BOV00P0000000013
1.0789700628
0.8901851623
BOV00P0000000014
1.1355475864
0.8551583545
BOV00P0000000015
1.1249250585
0.8965543061
BOV00P0000000016
2.1062526716
1.0292113908
BOV00P0000000017
0.7179246776
0.5176106423
BOV00P0000000018
0.9237959627
0.5030821271
BOV00P0000000019
32.8219854105
1.0750649208
BOV00P0000000020
0.9531368986
0.9921683998
Total number of rows:
85199
Table truncated, full table size
3580 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92948.CEL.gz
5.6 Mb
(ftp)
(http)
CEL
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