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GEO accession:
Sample GSM92949
Query DataSets for GSM92949
Status
Public on Jan 28, 2006
Title
47554
Sample type
RNA
Source name
Fat pad of an intact animal treated with corn oil (control)
Organism
Bos taurus
Characteristics
both the raw and normalized values are log 2 based.
Extracted molecule
total RNA
Label
biotin
Description
Single channel hybridization of biotin-labeled samples detected by Cy3-streptavidin staining
Data processing
is based on the SAS Mixed Model
Submission date
Jan 18, 2006
Last update date
May 05, 2006
Contact name
Robert W Li
E-mail(s)
[email protected]
Phone
301-504-5185
Fax
301-504-8414
Organization name
USDA
Department
Animal & Natural Resources Institute
Lab
Bovine Functional Genomics Laboratory
Street address
Barc East
City
Beltsville
State/province
MD
ZIP/Postal code
20705
Country
USA
Platform ID
GPL3711
Series (1)
GSE4054
Estrogen-responsive genes in the parenchyma and fat pad of the bovine mammary gland by microarray analysis
Data table header descriptions
ID_REF
VALUE
is the raw value (log2, geometric mean) of the 4 replicate features (spots) for each 60mer oligo
VALUE_Normalized
is the residual value (log2) normalized based on the SAS Mixed model fit across all probes
Data table
ID_REF
VALUE
VALUE_Normalized
BOV00P0000000001
16.1048168421
1.2313653180
BOV00P0000000002
2.2236488741
0.9695024256
BOV00P0000000003
0.7491642416
1.0726930210
BOV00P0000000004
1.9605294672
1.5172198999
BOV00P0000000005
2.4507884156
1.8849903374
BOV00P0000000006
8.4050885781
1.4973741373
BOV00P0000000007
1.4418032824
1.0630906789
BOV00P0000000008
1.4422592984
1.0621814379
BOV00P0000000009
6.8319515698
1.2023975931
BOV00P0000000010
6.7315551174
1.3893468759
BOV00P0000000011
0.3448002007
0.8740264444
BOV00P0000000012
0.9101463081
0.7046927468
BOV00P0000000013
0.9287271501
0.7795302474
BOV00P0000000014
1.5538641296
1.1904964894
BOV00P0000000015
0.9087658285
0.7368496327
BOV00P0000000016
2.3942682530
1.1902571403
BOV00P0000000017
1.6971183449
1.2448307753
BOV00P0000000018
1.2772388477
0.7076342115
BOV00P0000000019
49.5345723645
1.6506391232
BOV00P0000000020
0.8731498162
0.9246827343
Total number of rows:
85219
Table truncated, full table size
3582 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM92949.CEL.gz
5.6 Mb
(ftp)
(http)
CEL
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