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Sample GSM970183 Query DataSets for GSM970183
Status Public on Sep 15, 2012
Title Wild-type MEFs 2
Sample type RNA
 
Source name Wild-type MEFs
Organism Mus musculus
Characteristics genetic background: C57B/L6
genotype: Wild-type
cell type: Cultured T antigen transformed Mouse Embrionic Fibroblasts
Growth protocol Cultured in DMEM with NEAA, Pencillin Streptomycin, Glutamax
Extracted molecule total RNA
Extraction protocol RNAs were extracted using Trizol (Invitrogen) according to manufacturer's instruction
Label Biotin
Label protocol Labelled using Ambion WT Expression Kit and Affymetrix Hybridization, Wash and Stain Kit
 
Hybridization protocol Hybridized using Affymetrix Hybridization, Wash and Stain Kit
Scan protocol GCS3000 using AGCC 3
Description Wild-type MEFs
Data processing RMA
 
Submission date Jul 19, 2012
Last update date Sep 15, 2012
Contact name Brian Yee Hong Lam
E-mail(s) [email protected]
Organization name University of Cambridge
Department Metabolic Research Laboratories
Street address Box 289 Addenbookes Hospital, Hills Road
City Cambridge
ZIP/Postal code CB2 0QQ
Country United Kingdom
 
Platform ID GPL6246
Series (1)
GSE39492 Ascorbic acid depletion and scorbutic extracellular matrix in mice deficient in endoplasmic reticulum thiol oxidases

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
10338001 12.1309
10338002 8.03642
10338003 10.595
10338004 9.6445
10338005 3.12086
10338006 3.58826
10338007 4.29415
10338008 5.52739
10338009 9.82628
10338010 3.15857
10338011 7.47862
10338012 3.33479
10338013 2.92592
10338014 2.987
10338015 2.93468
10338016 9.13982
10338017 13.2344
10338018 8.50804
10338019 6.96818
10338020 9.7249

Total number of rows: 35556

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM970183_Affy0212-WT2-2-110524.CEL.gz 4.5 Mb (ftp)(http) CEL
GSM970183_Affy0212-WT2-2-110524.rma-gene-default.chp.gz 269.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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