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Sample GSM9711

Query DataSets for GSM9711

Status

Public on Aug 06, 2004

Title

nl027

Sample type

RNA

Source name

primary acute lymphoblastic leukemia cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:64, Count:32
Corner- Avg:4793, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:44.793552,SFGene:All
Background:Avg:36.66,Stdev:0.65,Max:38.3,Min:34.9
Noise:Avg:1.25,Stdev:0.04,Max:1.3,Min:1.1
RawQ:1.75
Keywords = ALL
Lot batch =

Submission date

Sep 05, 2003

Last update date

May 28, 2005

Contact name

William E Evans

E-mail(s)

[email protected]

Phone

901-495-4995

Fax

901-495-6869

URL

http://www.stjude.org/leukemia/bio_evans.htm

Organization name

St.Jude Children's Research Hospital

Department

Pharmaceutical Sciences

Lab

Evans

Street address

332 N. Lauderdale St.

City

Memphis

State/province

ZIP/Postal code

38105

Country

USA

Platform ID

GPL96

Series (10)

More...

GSE635	Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645	ASP resistant all ALL
GSE647	PRED resistant all ALL

Data table header descriptions
ID_REF	As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE	This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE	Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF	VALUE	DETECTION P-VALUE
1007_s_at	516.4	0.150527
1053_at	344.8	0.098054
117_at	233.0	0.234557
121_at	1943.2	0.001602
1255_g_at	26.8	0.458816
1294_at	1260.0	0.000805
1316_at	378.5	0.008689
1320_at	130.4	0.561639
1405_i_at	34.3	0.864026
1431_at	58.9	0.479380
1438_at	24.5	0.980696
1487_at	299.0	0.397994
1494_f_at	264.6	0.267463
1598_g_at	771.5	0.204022
160020_at	1013.8	0.081337
1729_at	271.2	0.107301
1773_at	323.7	0.138765
177_at	47.6	0.561639
179_at	856.7	0.267463
1861_at	272.4	0.117160

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM9711.CEL.gz	2.9 Mb	(ftp)(http)	CEL