NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM9816 Query DataSets for GSM9816
Status Public on Aug 06, 2004
Title nl132
Sample type RNA
 
Source name primary acute lymphoblastic leukemia cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description Sample Type: Human Total RNA
Project: Evans
Sample User: jmorris
Experiment User: jmorris
Algorithm: Statistical
Corner+ Avg:65, Count:32
Corner- Avg:4540, Count:32
BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:19.887140,SFGene:All
Background:Avg:45.19,Stdev:0.70,Max:46.7,Min:43.4
Noise:Avg:1.89,Stdev:0.10,Max:2.4,Min:1.6
RawQ:2.05
Keywords = ALL
Lot batch =
 
Submission date Sep 06, 2003
Last update date May 28, 2005
Contact name William E Evans
E-mail(s) [email protected]
Phone 901-495-4995
Fax 901-495-6869
URL http://www.stjude.org/leukemia/bio_evans.htm
Organization name St.Jude Children's Research Hospital
Department Pharmaceutical Sciences
Lab Evans
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL96
Series (8)
GSE635 Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645 ASP resistant all ALL
GSE649 VCR resistant all ALL

Data table header descriptions
ID_REF As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
DETECTION P-VALUE Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1123.5 0.003067
1053_at 313.0 0.089405
117_at 409.5 0.024711
121_at 1640.5 0.002617
1255_g_at 170.1 0.438361
1294_at 800.9 0.000673
1316_at 361.3 0.035163
1320_at 142.8 0.581931
1405_i_at 40.6 0.681117
1431_at 196.2 0.024711
1438_at 150.8 0.378184
1487_at 638.6 0.234557
1494_f_at 434.3 0.014937
1598_g_at 994.9 0.107301
160020_at 890.2 0.107301
1729_at 339.4 0.013092
1773_at 447.9 0.027860
177_at 67.0 0.438361
179_at 1464.9 0.027860
1861_at 485.5 0.008689

Total number of rows: 22283

Table truncated, full table size 561 Kbytes.




Supplementary file Size Download File type/resource
GSM9816.CEL.gz 3.2 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap