ProfileGDS2819 / 1558329_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 61% 69% 65% 83% 75% 71% 73% 72% 69% 77% 81% 80% 75% 81% 83% 79% 68% 78% 72% 66% 84% 69% 81% 80% 65% 55% 51% 62% 65% 67% 67% 70% 66% 60% 62% 64% 75% 65% 56% 66% 66% 60% 77% 79% 80% 69% 78% 82% 73% 61% 70% 67% 62% 72% 65% 68% 78% 35% 56% 11% 70% 64% 54% 67% 64% 63% 57% 61% 64% 75% 67% 45% 65% 66% 66% 69% 83% 78% 66% 79% 83% 76% 56% 67% 69% 49% 77% 65% 75% 81% 62% 56% 57% 64% 55% 64% 66% 65% 63% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A165.47761
GSM187701PAD_00233_sample 2_preparation A291.2469
GSM187704PAD_00234_sample 3_preparation A267.3265
GSM187707PAD_00331_sample 4_preparation A813.93183
GSM187710PAD_00236_sample 5_preparation A468.9975
GSM187713PAD_00237_sample 6_preparation A286.53471
GSM187716PAD_00238_sample 7_preparation A319.19773
GSM187719PAD_00239_sample 8_preparation A359.66772
GSM187722PAD_00256_sample 9_preparation A305.16669
GSM187725PAD_00257_sample 10_preparation A537.56577
GSM187728PAD_00258_sample 11_preparation A744.94381
GSM187731PAD_00259_sample 12_preparation A629.85780
GSM187734PAD_00260_sample 13_preparation A426.32975
GSM187737PAD_00261_sample 14_preparation A689.8781
GSM187740PAD_00262_sample 15_preparation A822.3983
GSM187743PAD_00263_sample 16_preparation A595.02379
GSM187746PAD_00280_sample 17_preparation A283.65768
GSM187749PAD_00281_sample 18_preparation A550.13578
GSM187752PAD_00282_sample 19_preparation A363.01672
GSM187755PAD_00283_sample 20_preparation A235.89666
GSM187758PAD_00284_sample 21_preparation A875.70784
GSM187761PAD_00285_sample 22_preparation A312.07469
GSM187764PAD_00286_sample 23_preparation A634.06981
GSM187767PAD_00287_sample 24_preparation A727.7580
GSM187770PAD_00304_sample 25_preparation A_replicate 1233.56365
GSM187771PAD_00305_sample 25_preparation A_replicate 2134.13455
GSM187772PAD_00306_sample 25_preparation A_replicate 3108.70351
GSM187780PAD_00313_sample 26_preparation A_replicate 1171.89662
GSM187781PAD_00314_sample 26_preparation A_replicate 2198.9965
GSM187782PAD_00315_sample 26_preparation A_replicate 3229.64167
GSM187788PAD_00322_sample 27_preparation A_replicate 1250.2867
GSM187789PAD_00323_sample 27_preparation A_replicate 2306.70370
GSM187790PAD_00324_sample 27_preparation A_replicate 3229.07166
GSM187699PAD_00240_sample 1_preparation B164.5860
GSM187702PAD_00241_sample 2_preparation B212.71162
GSM187705PAD_00242_sample 3_preparation B251.86864
GSM187708PAD_00243_sample 4_preparation B511.61775
GSM187711PAD_00244_sample 5_preparation B281.22265
GSM187714PAD_00245_sample 6_preparation B145.56656
GSM187717PAD_00246_sample 7_preparation B234.77866
GSM187720PAD_00247_sample 8_preparation B278.47166
GSM187723PAD_00264_sample 9_preparation B217.97360
GSM187726PAD_00340_sample 10_preparation B623.73577
GSM187729PAD_00266_sample 11_preparation B701.3479
GSM187732PAD_00267_sample 12_preparation B680.51380
GSM187735PAD_00268_sample 13_preparation B326.60769
GSM187738PAD_00269_sample 14_preparation B609.57678
GSM187741PAD_00270_sample 15_preparation B845.31282
GSM187744PAD_00271_sample 16_preparation B484.26473
GSM187747PAD_00288_sample 17_preparation B208.37461
GSM187750PAD_00289_sample 18_preparation B348.64470
GSM187753PAD_00290_sample 19_preparation B308.38667
GSM187756PAD_00291_sample 20_preparation B194.17162
GSM187759PAD_00292_sample 21_preparation B363.71972
GSM187762PAD_00293_sample 22_preparation B269.16465
GSM187765PAD_00294_sample 23_preparation B270.48268
GSM187768PAD_00295_sample 24_preparation B610.6878
GSM187773PAD_00307_sample 25_preparation B_replicate 166.863335
GSM187774PAD_00308_sample 25_preparation B_replicate 2176.98756
GSM187775PAD_00309_sample 25_preparation B_replicate 311.900511
GSM187776PAD_00333_sample 25_preparation B_replicate 3323.50370
GSM187783PAD_00316_sample 26_preparation B_replicate 1208.99464
GSM187784PAD_00317_sample 26_preparation B_replicate 2142.83354
GSM187791PAD_00325_sample 27_preparation B_replicate 1283.27167
GSM187792PAD_00326_sample 27_preparation B_replicate 2221.02964
GSM187793PAD_00327_sample 27_preparation B_replicate 3218.1963
GSM187700PAD_00248_sample 1_preparation C158.0257
GSM187703PAD_00249_sample 2_preparation C191.83661
GSM187706PAD_00250_sample 3_preparation C247.95464
GSM187709PAD_00251_sample 4_preparation C477.96475
GSM187712PAD_00252_sample 5_preparation C280.72367
GSM187715PAD_00253_sample 6_preparation C103.74845
GSM187718PAD_00254_sample 7_preparation C205.56165
GSM187721PAD_00255_sample 8_preparation C252.86866
GSM187724PAD_00272_sample 9_preparation C267.21966
GSM187727PAD_00273_sample 10_preparation C335.15669
GSM187730PAD_00274_sample 11_preparation C877.92483
GSM187733PAD_00275_sample 12_preparation C551.71678
GSM187736PAD_00276_sample 13_preparation C238.04966
GSM187739PAD_00277_sample 14_preparation C624.49979
GSM187742PAD_00278_sample 15_preparation C843.84783
GSM187745PAD_00279_sample 16_preparation C535.23476
GSM187748PAD_00296_sample 17_preparation C142.55756
GSM187751PAD_00297_sample 18_preparation C277.73167
GSM187754PAD_00298_sample 19_preparation C319.96569
GSM187757PAD_00299_sample 20_preparation C87.766849
GSM187760PAD_00300_sample 21_preparation C515.5577
GSM187763PAD_00301_sample 22_preparation C253.06565
GSM187766PAD_00302_sample 23_preparation C415.43475
GSM187769PAD_00303_sample 24_preparation C748.03681
GSM187777PAD_00310_sample 25_preparation C_replicate 1193.79862
GSM187778PAD_00311_sample 25_preparation C_replicate 2145.2956
GSM187779PAD_00332_sample 25_preparation C_replicate 3171.06957
GSM187785PAD_00320_sample 26_preparation C_replicate 1207.65964
GSM187786PAD_00321_sample 26_preparation C_replicate 2128.3855
GSM187787PAD_00319_sample 26_preparation C_replicate 3206.87564
GSM187794PAD_00328_sample 27_preparation C_replicate 1232.54466
GSM187795PAD_00329_sample 27_preparation C_replicate 2241.21165
GSM187796PAD_00330_sample 27_preparation C_replicate 3202.263