ProfileGDS2819 / 1558330_x_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 31% 68% 64% 81% 70% 61% 68% 54% 70% 72% 78% 75% 72% 74% 80% 76% 65% 76% 73% 68% 80% 65% 76% 78% 15% 20% 19% 56% 37% 48% 65% 67% 62% 11% 53% 58% 72% 62% 60% 33% 28% 60% 38% 81% 71% 62% 74% 74% 59% 38% 69% 57% 42% 71% 61% 72% 73% 20% 15% 55% 25% 65% 24% 48% 22% 60% 48% 61% 42% 78% 62% 57% 60% 55% 19% 62% 78% 69% 67% 68% 80% 69% 57% 68% 65% 57% 70% 56% 67% 73% 52% 40% 36% 55% 40% 30% 60% 53% 70% sort by protocol sort by individual sort by disease state Gene Expression Profile
Graph caption help
SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A42.716431
GSM187701PAD_00233_sample 2_preparation A273.61268
GSM187704PAD_00234_sample 3_preparation A251.64964
GSM187707PAD_00331_sample 4_preparation A734.92181
GSM187710PAD_00236_sample 5_preparation A306.78870
GSM187713PAD_00237_sample 6_preparation A150.35861
GSM187716PAD_00238_sample 7_preparation A214.01568
GSM187719PAD_00239_sample 8_preparation A156.92154
GSM187722PAD_00256_sample 9_preparation A316.21570
GSM187725PAD_00257_sample 10_preparation A372.28972
GSM187728PAD_00258_sample 11_preparation A597.99278
GSM187731PAD_00259_sample 12_preparation A427.83275
GSM187734PAD_00260_sample 13_preparation A335.96572
GSM187737PAD_00261_sample 14_preparation A416.02574
GSM187740PAD_00262_sample 15_preparation A656.96580
GSM187743PAD_00263_sample 16_preparation A457.77676
GSM187746PAD_00280_sample 17_preparation A231.45565
GSM187749PAD_00281_sample 18_preparation A452.61276
GSM187752PAD_00282_sample 19_preparation A387.52873
GSM187755PAD_00283_sample 20_preparation A254.42668
GSM187758PAD_00284_sample 21_preparation A661.64180
GSM187761PAD_00285_sample 22_preparation A249.8465
GSM187764PAD_00286_sample 23_preparation A434.77176
GSM187767PAD_00287_sample 24_preparation A594.79778
GSM187770PAD_00304_sample 25_preparation A_replicate 115.396115
GSM187771PAD_00305_sample 25_preparation A_replicate 222.529120
GSM187772PAD_00306_sample 25_preparation A_replicate 318.678419
GSM187780PAD_00313_sample 26_preparation A_replicate 1127.64156
GSM187781PAD_00314_sample 26_preparation A_replicate 257.817737
GSM187782PAD_00315_sample 26_preparation A_replicate 383.788848
GSM187788PAD_00322_sample 27_preparation A_replicate 1218.64665
GSM187789PAD_00323_sample 27_preparation A_replicate 2237.83667
GSM187790PAD_00324_sample 27_preparation A_replicate 3180.59162
GSM187699PAD_00240_sample 1_preparation B9.4280111
GSM187702PAD_00241_sample 2_preparation B129.09253
GSM187705PAD_00242_sample 3_preparation B169.74758
GSM187708PAD_00243_sample 4_preparation B405.68172
GSM187711PAD_00244_sample 5_preparation B230.11562
GSM187714PAD_00245_sample 6_preparation B180.52360
GSM187717PAD_00246_sample 7_preparation B52.743533
GSM187720PAD_00247_sample 8_preparation B43.729528
GSM187723PAD_00264_sample 9_preparation B215.08760
GSM187726PAD_00340_sample 10_preparation B117.44138
GSM187729PAD_00266_sample 11_preparation B800.29781
GSM187732PAD_00267_sample 12_preparation B359.29771
GSM187735PAD_00268_sample 13_preparation B206.92362
GSM187738PAD_00269_sample 14_preparation B465.13474
GSM187741PAD_00270_sample 15_preparation B485.37874
GSM187744PAD_00271_sample 16_preparation B243.16359
GSM187747PAD_00288_sample 17_preparation B77.665738
GSM187750PAD_00289_sample 18_preparation B309.52969
GSM187753PAD_00290_sample 19_preparation B164.48457
GSM187756PAD_00291_sample 20_preparation B85.162742
GSM187759PAD_00292_sample 21_preparation B341.21871
GSM187762PAD_00293_sample 22_preparation B219.37761
GSM187765PAD_00294_sample 23_preparation B337.94372
GSM187768PAD_00295_sample 24_preparation B444.64173
GSM187773PAD_00307_sample 25_preparation B_replicate 124.346920
GSM187774PAD_00308_sample 25_preparation B_replicate 220.050315
GSM187775PAD_00309_sample 25_preparation B_replicate 3150.65355
GSM187776PAD_00333_sample 25_preparation B_replicate 335.36925
GSM187783PAD_00316_sample 26_preparation B_replicate 1219.47265
GSM187784PAD_00317_sample 26_preparation B_replicate 231.478424
GSM187791PAD_00325_sample 27_preparation B_replicate 1104.82648
GSM187792PAD_00326_sample 27_preparation B_replicate 225.296522
GSM187793PAD_00327_sample 27_preparation B_replicate 3179.07560
GSM187700PAD_00248_sample 1_preparation C109.72448
GSM187703PAD_00249_sample 2_preparation C195.53661
GSM187706PAD_00250_sample 3_preparation C94.258142
GSM187709PAD_00251_sample 4_preparation C569.85478
GSM187712PAD_00252_sample 5_preparation C209.83862
GSM187715PAD_00253_sample 6_preparation C165.80857
GSM187718PAD_00254_sample 7_preparation C158.79160
GSM187721PAD_00255_sample 8_preparation C148.55355
GSM187724PAD_00272_sample 9_preparation C22.070719
GSM187727PAD_00273_sample 10_preparation C213.12262
GSM187730PAD_00274_sample 11_preparation C594.41878
GSM187733PAD_00275_sample 12_preparation C295.69769
GSM187736PAD_00276_sample 13_preparation C262.00367
GSM187739PAD_00277_sample 14_preparation C31068
GSM187742PAD_00278_sample 15_preparation C706.60280
GSM187745PAD_00279_sample 16_preparation C318.2969
GSM187748PAD_00296_sample 17_preparation C150.18657
GSM187751PAD_00297_sample 18_preparation C287.62968
GSM187754PAD_00298_sample 19_preparation C234.43565
GSM187757PAD_00299_sample 20_preparation C127.1357
GSM187760PAD_00300_sample 21_preparation C297.69970
GSM187763PAD_00301_sample 22_preparation C158.73656
GSM187766PAD_00302_sample 23_preparation C232.03767
GSM187769PAD_00303_sample 24_preparation C401.47373
GSM187777PAD_00310_sample 25_preparation C_replicate 1116.0852
GSM187778PAD_00311_sample 25_preparation C_replicate 270.544540
GSM187779PAD_00332_sample 25_preparation C_replicate 372.843936
GSM187785PAD_00320_sample 26_preparation C_replicate 1131.44455
GSM187786PAD_00321_sample 26_preparation C_replicate 268.9640
GSM187787PAD_00319_sample 26_preparation C_replicate 340.359430
GSM187794PAD_00328_sample 27_preparation C_replicate 1163.69860
GSM187795PAD_00329_sample 27_preparation C_replicate 2138.3553
GSM187796PAD_00330_sample 27_preparation C_replicate 3318.42370