ProfileGDS2819 / 236077_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 65% 70% 60% 76% 76% 64% 66% 61% 73% 70% 71% 84% 76% 75% 71% 75% 67% 71% 71% 67% 67% 70% 75% 77% 68% 70% 73% 81% 77% 80% 73% 70% 76% 71% 70% 66% 67% 70% 70% 50% 60% 70% 69% 69% 83% 73% 74% 69% 80% 72% 67% 65% 74% 67% 68% 79% 75% 69% 68% 64% 83% 78% 79% 73% 72% 69% 72% 73% 56% 72% 74% 70% 70% 69% 69% 63% 68% 82% 75% 77% 70% 77% 68% 67% 69% 72% 64% 68% 80% 72% 72% 72% 72% 82% 82% 78% 74% 76% 72% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A201.03865
GSM187701PAD_00233_sample 2_preparation A313.32970
GSM187704PAD_00234_sample 3_preparation A206.8860
GSM187707PAD_00331_sample 4_preparation A471.44376
GSM187710PAD_00236_sample 5_preparation A514.16976
GSM187713PAD_00237_sample 6_preparation A186.65464
GSM187716PAD_00238_sample 7_preparation A189.48866
GSM187719PAD_00239_sample 8_preparation A209.07461
GSM187722PAD_00256_sample 9_preparation A404.75273
GSM187725PAD_00257_sample 10_preparation A326.7470
GSM187728PAD_00258_sample 11_preparation A372.35371
GSM187731PAD_00259_sample 12_preparation A902.58484
GSM187734PAD_00260_sample 13_preparation A457.50176
GSM187737PAD_00261_sample 14_preparation A452.81975
GSM187740PAD_00262_sample 15_preparation A344.52771
GSM187743PAD_00263_sample 16_preparation A437.9775
GSM187746PAD_00280_sample 17_preparation A262.34267
GSM187749PAD_00281_sample 18_preparation A315.86471
GSM187752PAD_00282_sample 19_preparation A340.33671
GSM187755PAD_00283_sample 20_preparation A250.25767
GSM187758PAD_00284_sample 21_preparation A224.48967
GSM187761PAD_00285_sample 22_preparation A343.02370
GSM187764PAD_00286_sample 23_preparation A395.36475
GSM187767PAD_00287_sample 24_preparation A570.37177
GSM187770PAD_00304_sample 25_preparation A_replicate 1280.17968
GSM187771PAD_00305_sample 25_preparation A_replicate 2315.51170
GSM187772PAD_00306_sample 25_preparation A_replicate 3374.95273
GSM187780PAD_00313_sample 26_preparation A_replicate 1640.31281
GSM187781PAD_00314_sample 26_preparation A_replicate 2484.24677
GSM187782PAD_00315_sample 26_preparation A_replicate 3579.51880
GSM187788PAD_00322_sample 27_preparation A_replicate 1372.70873
GSM187789PAD_00323_sample 27_preparation A_replicate 2307.6570
GSM187790PAD_00324_sample 27_preparation A_replicate 3469.80176
GSM187699PAD_00240_sample 1_preparation B337.36271
GSM187702PAD_00241_sample 2_preparation B351.42670
GSM187705PAD_00242_sample 3_preparation B281.27366
GSM187708PAD_00243_sample 4_preparation B300.67167
GSM187711PAD_00244_sample 5_preparation B384.09670
GSM187714PAD_00245_sample 6_preparation B319.39470
GSM187717PAD_00246_sample 7_preparation B109.88850
GSM187720PAD_00247_sample 8_preparation B201.12960
GSM187723PAD_00264_sample 9_preparation B373.18270
GSM187726PAD_00340_sample 10_preparation B419.6169
GSM187729PAD_00266_sample 11_preparation B368.74269
GSM187732PAD_00267_sample 12_preparation B827.51483
GSM187735PAD_00268_sample 13_preparation B435.1373
GSM187738PAD_00269_sample 14_preparation B482.55174
GSM187741PAD_00270_sample 15_preparation B334.19769
GSM187744PAD_00271_sample 16_preparation B707.39280
GSM187747PAD_00288_sample 17_preparation B408.08972
GSM187750PAD_00289_sample 18_preparation B274.30167
GSM187753PAD_00290_sample 19_preparation B272.9365
GSM187756PAD_00291_sample 20_preparation B402.05774
GSM187759PAD_00292_sample 21_preparation B274.13467
GSM187762PAD_00293_sample 22_preparation B328.2268
GSM187765PAD_00294_sample 23_preparation B571.39879
GSM187768PAD_00295_sample 24_preparation B498.10875
GSM187773PAD_00307_sample 25_preparation B_replicate 1334.28669
GSM187774PAD_00308_sample 25_preparation B_replicate 2332.08168
GSM187775PAD_00309_sample 25_preparation B_replicate 3248.364
GSM187776PAD_00333_sample 25_preparation B_replicate 3789.53983
GSM187783PAD_00316_sample 26_preparation B_replicate 1516.93178
GSM187784PAD_00317_sample 26_preparation B_replicate 2590.8879
GSM187791PAD_00325_sample 27_preparation B_replicate 1395.98173
GSM187792PAD_00326_sample 27_preparation B_replicate 2382.18472
GSM187793PAD_00327_sample 27_preparation B_replicate 3320.43469
GSM187700PAD_00248_sample 1_preparation C360.60972
GSM187703PAD_00249_sample 2_preparation C399.96173
GSM187706PAD_00250_sample 3_preparation C173.12956
GSM187709PAD_00251_sample 4_preparation C405.20172
GSM187712PAD_00252_sample 5_preparation C459.97174
GSM187715PAD_00253_sample 6_preparation C321.86670
GSM187718PAD_00254_sample 7_preparation C270.72670
GSM187721PAD_00255_sample 8_preparation C309.48469
GSM187724PAD_00272_sample 9_preparation C342.02569
GSM187727PAD_00273_sample 10_preparation C235.86463
GSM187730PAD_00274_sample 11_preparation C297.83968
GSM187733PAD_00275_sample 12_preparation C758.76182
GSM187736PAD_00276_sample 13_preparation C454.60275
GSM187739PAD_00277_sample 14_preparation C537.92577
GSM187742PAD_00278_sample 15_preparation C345.52570
GSM187745PAD_00279_sample 16_preparation C558.19277
GSM187748PAD_00296_sample 17_preparation C303.95768
GSM187751PAD_00297_sample 18_preparation C277.61167
GSM187754PAD_00298_sample 19_preparation C317.38769
GSM187757PAD_00299_sample 20_preparation C328.02772
GSM187760PAD_00300_sample 21_preparation C209.38564
GSM187763PAD_00301_sample 22_preparation C312.03368
GSM187766PAD_00302_sample 23_preparation C625.94480
GSM187769PAD_00303_sample 24_preparation C379.93672
GSM187777PAD_00310_sample 25_preparation C_replicate 1373.09572
GSM187778PAD_00311_sample 25_preparation C_replicate 2364.22472
GSM187779PAD_00332_sample 25_preparation C_replicate 3373.03472
GSM187785PAD_00320_sample 26_preparation C_replicate 1706.23782
GSM187786PAD_00321_sample 26_preparation C_replicate 2696.58682
GSM187787PAD_00319_sample 26_preparation C_replicate 3525.71878
GSM187794PAD_00328_sample 27_preparation C_replicate 1399.77174
GSM187795PAD_00329_sample 27_preparation C_replicate 2492.20876
GSM187796PAD_00330_sample 27_preparation C_replicate 3363.17872