ProfileGDS2819 / 236533_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 71% 80% 69% 82% 71% 87% 73% 82% 70% 63% 77% 88% 88% 82% 76% 70% 67% 70% 86% 81% 71% 83% 82% 84% 72% 73% 72% 84% 84% 81% 85% 86% 84% 75% 81% 71% 81% 68% 89% 75% 80% 71% 73% 84% 88% 86% 83% 79% 82% 69% 70% 81% 78% 69% 80% 81% 80% 70% 71% 68% 85% 85% 87% 90% 89% 90% 79% 78% 74% 83% 71% 88% 79% 75% 76% 63% 79% 88% 85% 82% 82% 70% 60% 73% 87% 79% 70% 83% 83% 83% 64% 72% 73% 81% 84% 84% 87% 85% 88% sort by protocol sort by individual sort by disease state Gene Expression Profile
Graph caption help
SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A290.34871
GSM187701PAD_00233_sample 2_preparation A614.94480
GSM187704PAD_00234_sample 3_preparation A325.7569
GSM187707PAD_00331_sample 4_preparation A778.13582
GSM187710PAD_00236_sample 5_preparation A327.7271
GSM187713PAD_00237_sample 6_preparation A1206.0887
GSM187716PAD_00238_sample 7_preparation A320.3573
GSM187719PAD_00239_sample 8_preparation A684.74282
GSM187722PAD_00256_sample 9_preparation A324.53770
GSM187725PAD_00257_sample 10_preparation A201.0763
GSM187728PAD_00258_sample 11_preparation A577.65677
GSM187731PAD_00259_sample 12_preparation A1286.2488
GSM187734PAD_00260_sample 13_preparation A1219.3888
GSM187737PAD_00261_sample 14_preparation A746.95682
GSM187740PAD_00262_sample 15_preparation A510.4876
GSM187743PAD_00263_sample 16_preparation A283.54570
GSM187746PAD_00280_sample 17_preparation A261.22767
GSM187749PAD_00281_sample 18_preparation A288.90670
GSM187752PAD_00282_sample 19_preparation A1167.3286
GSM187755PAD_00283_sample 20_preparation A635.02981
GSM187758PAD_00284_sample 21_preparation A315.51571
GSM187761PAD_00285_sample 22_preparation A890.09383
GSM187764PAD_00286_sample 23_preparation A743.27282
GSM187767PAD_00287_sample 24_preparation A980.33684
GSM187770PAD_00304_sample 25_preparation A_replicate 1363.62972
GSM187771PAD_00305_sample 25_preparation A_replicate 2408.77373
GSM187772PAD_00306_sample 25_preparation A_replicate 3356.69972
GSM187780PAD_00313_sample 26_preparation A_replicate 1881.38284
GSM187781PAD_00314_sample 26_preparation A_replicate 2874.84284
GSM187782PAD_00315_sample 26_preparation A_replicate 3643.85881
GSM187788PAD_00322_sample 27_preparation A_replicate 11003.6785
GSM187789PAD_00323_sample 27_preparation A_replicate 21055.2786
GSM187790PAD_00324_sample 27_preparation A_replicate 3894.44584
GSM187699PAD_00240_sample 1_preparation B438.28675
GSM187702PAD_00241_sample 2_preparation B752.92281
GSM187705PAD_00242_sample 3_preparation B383.59871
GSM187708PAD_00243_sample 4_preparation B745.07381
GSM187711PAD_00244_sample 5_preparation B342.3168
GSM187714PAD_00245_sample 6_preparation B1400.9689
GSM187717PAD_00246_sample 7_preparation B402.92975
GSM187720PAD_00247_sample 8_preparation B689.46180
GSM187723PAD_00264_sample 9_preparation B411.25571
GSM187726PAD_00340_sample 10_preparation B502.07473
GSM187729PAD_00266_sample 11_preparation B956.70284
GSM187732PAD_00267_sample 12_preparation B1344.2288
GSM187735PAD_00268_sample 13_preparation B1103.2286
GSM187738PAD_00269_sample 14_preparation B864.46483
GSM187741PAD_00270_sample 15_preparation B679.82279
GSM187744PAD_00271_sample 16_preparation B798.97882
GSM187747PAD_00288_sample 17_preparation B334.44769
GSM187750PAD_00289_sample 18_preparation B333.30370
GSM187753PAD_00290_sample 19_preparation B811.61581
GSM187756PAD_00291_sample 20_preparation B520.8778
GSM187759PAD_00292_sample 21_preparation B308.22369
GSM187762PAD_00293_sample 22_preparation B718.32280
GSM187765PAD_00294_sample 23_preparation B705.12781
GSM187768PAD_00295_sample 24_preparation B716.53780
GSM187773PAD_00307_sample 25_preparation B_replicate 1363.28770
GSM187774PAD_00308_sample 25_preparation B_replicate 2377.53571
GSM187775PAD_00309_sample 25_preparation B_replicate 3326.53168
GSM187776PAD_00333_sample 25_preparation B_replicate 3984.64285
GSM187783PAD_00316_sample 26_preparation B_replicate 11012.5785
GSM187784PAD_00317_sample 26_preparation B_replicate 21246.4987
GSM187791PAD_00325_sample 27_preparation B_replicate 11643.6590
GSM187792PAD_00326_sample 27_preparation B_replicate 21464.1289
GSM187793PAD_00327_sample 27_preparation B_replicate 31575.8690
GSM187700PAD_00248_sample 1_preparation C590.48379
GSM187703PAD_00249_sample 2_preparation C563.3678
GSM187706PAD_00250_sample 3_preparation C462.08374
GSM187709PAD_00251_sample 4_preparation C873.91183
GSM187712PAD_00252_sample 5_preparation C370.52371
GSM187715PAD_00253_sample 6_preparation C1220.8188
GSM187718PAD_00254_sample 7_preparation C525.23779
GSM187721PAD_00255_sample 8_preparation C476.675
GSM187724PAD_00272_sample 9_preparation C541.7676
GSM187727PAD_00273_sample 10_preparation C231.16563
GSM187730PAD_00274_sample 11_preparation C632.52379
GSM187733PAD_00275_sample 12_preparation C1355.5188
GSM187736PAD_00276_sample 13_preparation C1020.985
GSM187739PAD_00277_sample 14_preparation C784.76882
GSM187742PAD_00278_sample 15_preparation C781.86582
GSM187745PAD_00279_sample 16_preparation C343.64170
GSM187748PAD_00296_sample 17_preparation C182.22360
GSM187751PAD_00297_sample 18_preparation C406.89973
GSM187754PAD_00298_sample 19_preparation C1287.2887
GSM187757PAD_00299_sample 20_preparation C548.6379
GSM187760PAD_00300_sample 21_preparation C297.09870
GSM187763PAD_00301_sample 22_preparation C882.07883
GSM187766PAD_00302_sample 23_preparation C791.67583
GSM187769PAD_00303_sample 24_preparation C882.7983
GSM187777PAD_00310_sample 25_preparation C_replicate 1222.84364
GSM187778PAD_00311_sample 25_preparation C_replicate 2388.21172
GSM187779PAD_00332_sample 25_preparation C_replicate 3408.91473
GSM187785PAD_00320_sample 26_preparation C_replicate 1677.50881
GSM187786PAD_00321_sample 26_preparation C_replicate 2855.684
GSM187787PAD_00319_sample 26_preparation C_replicate 3893.17484
GSM187794PAD_00328_sample 27_preparation C_replicate 11235.5787
GSM187795PAD_00329_sample 27_preparation C_replicate 2940.61885
GSM187796PAD_00330_sample 27_preparation C_replicate 31305.2188