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Links from GEO Profiles

Items: 17

1.
Value/Rank Plot

SOX15 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SOX15, SRY-box 15
Organism:
Homo sapiens
Reporter:
GPL6244, 8012220 (ID_REF), GDS5085, NM_006942, AB006867, BC000985, BC072003, chr17:7491496-7493494 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112039378

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

2.
Value/Rank Plot

MPDU1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
MPDU1, mannose-P-dolichol utilization defect 1
Organism:
Homo sapiens
Reporter:
GPL6244, 8004521 (ID_REF), GDS5085, NM_004870, NR_024603, XM_006721599, AF059752, BC001898, DQ499597, AF258568, chr17:7486974-7491808 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038650

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

3.
Value/Rank Plot

CD68 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
CD68, CD68 molecule
Organism:
Homo sapiens
Reporter:
GPL6244, 8004510 (ID_REF), GDS5085, NM_001040059, NM_001251, BC015557, BT009923, AB209593, chr17:7482805-7485431 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038649

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

4.
Value/Rank Plot

SNORA67 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SNORA67, small nucleolar RNA, H/ACA box 67
Organism:
Homo sapiens
Reporter:
GPL6244, 8004508 (ID_REF), GDS5085, NR_002912, AB209593, chr17:7481273-7481409 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038648

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

SENP3-EIF4A1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SENP3-EIF4A1, SENP3-EIF4A1 readthrough (NMD candidate) (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8004497 (ID_REF), GDS5085, NM_001204510, NM_001416, NR_037926, BC006210, BC009585, BC073752, BT019880, BT019881, D13748, AB209593, BC006380, chr17:7476024-7482324 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038646

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

6.
Value/Rank Plot

SNORA48 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SNORA48, small nucleolar RNA, H/ACA box 48 (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8004506 (ID_REF), GDS5085, NR_002918, U79273, chr17:7478031-7478165 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038647

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

7.
Value/Rank Plot

FXR2 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
FXR2, FMR1 autosomal homolog 2
Organism:
Homo sapiens
Reporter:
GPL6244, 8012226 (ID_REF), GDS5085, NM_004860, XR_243572, BC020090, BC051907, BC067272, BT009817, U31501, chr17:7494548-7518169 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112039379

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

8.
Value/Rank Plot

SENP3-EIF4A1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SENP3-EIF4A1, SENP3-EIF4A1 readthrough (NMD candidate) (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8004485 (ID_REF), GDS5085, NM_015670, NR_037926, AF199459, AY008763, BC080658, AK000923, chr17:7465272-7475287 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038645

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

9.
Value/Rank Plot

TNFSF12-TNFSF13 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
TNFSF12-TNFSF13, TNFSF12-TNFSF13 readthrough (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8004464 (ID_REF), GDS5085, NM_001198622, NM_001198623, NM_001198624, NM_003808, NM_172087, NM_172088, NM_172089, NR_037146, NR_073490, AF046888, AF114011, AF114012, AF114013, AF136294, AF184972, AY081050, AY081051, AY358880, BC008042, BC019047, BC071837, BT019561, BT019562, CR542040, CR542073, DQ149579, EF211088, NM_003809, AF030099, AF055872, AY358870, BC104420, chr17:7452208-7464925 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038644

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

SHBG - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SHBG, sex hormone binding globulin
Organism:
Homo sapiens
Reporter:
GPL6244, 8004534 (ID_REF), GDS5085, NM_001040, NM_001146279, NM_001146280, NM_001146281, NM_001289113, NM_001289114, NM_001289115, NM_001289116, BC101785, BC112186, EU352665, EU352666, EU352667, EU352668, EU352669, chr17:7531374-7536701 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038652

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

11.
Value/Rank Plot

SAT2 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SAT2, spermidine/spermine N1-acetyltransferase family member 2
Organism:
Homo sapiens
Reporter:
GPL6244, 8012247 (ID_REF), GDS5085, NM_133491, AF348524, BC011751, BC095466, chr17:7529552-7531187 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112039380

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

12.
Value/Rank Plot

ATP1B2 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
ATP1B2, ATPase Na+/K+ transporting subunit beta 2
Organism:
Homo sapiens
Reporter:
GPL6244, 8004545 (ID_REF), GDS5085, NM_001678, BC126175, M81181, U45945, chr17:7554254-7561089 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038653

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

13.
Value/Rank Plot

TP53 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
TP53, tumor protein p53
Organism:
Homo sapiens
Reporter:
GPL6244, 8012257 (ID_REF), GDS5085, NM_000546, NM_001126112, NM_001126113, NM_001126114, NM_001126115, NM_001126116, NM_001126117, NM_001126118, NM_001276695, NM_001276696, NM_001276697, NM_001276698, NM_001276699, NM_001276760, NM_001276761, AB082923, AF307851, BC003596, BT019622, DQ186648, DQ186649, DQ186650, DQ186651, DQ186652, DQ191317, DQ263704, DQ286964, EF101867, EF101868, EF101869, FJ207420, JN900492, JQ694049, JQ694050, JQ694051, M14694, M14695, K03199, chr17:7571720-7590917 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112039381

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

14.
Value/Rank Plot

WRAP53 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
WRAP53, WD repeat containing antisense to TP53
Organism:
Homo sapiens
Reporter:
GPL6244, 8004556 (ID_REF), GDS5085, NM_001143990, NM_018081, DQ431241, NM_001143991, AY766322, NM_001143992, BC002336, DQ431240, chr17:7589998-7606820 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038654

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

15.
Value/Rank Plot

EFNB3 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
EFNB3, ephrin B3
Organism:
Homo sapiens
Reporter:
GPL6244, 8004571 (ID_REF), GDS5085, NM_001406, AK314841, BC042944, U57001, U62775, U66406, chr17:7608450-7614696 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038655

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

16.
Value/Rank Plot

DNAH2 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
DNAH2, dynein axonemal heavy chain 2
Organism:
Homo sapiens
Reporter:
GPL6244, 8004580 (ID_REF), GDS5085, NM_020877, AB040936, BC034225, BX648163, chr17:7620672-7737062 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038656

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

17.
Value/Rank Plot

KDM6B - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
KDM6B, lysine demethylase 6B
Organism:
Homo sapiens
Reporter:
GPL6244, 8004671 (ID_REF), GDS5085, NM_001080424, BC009994, chr17:7743222-7758106 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038657

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

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