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Links from GEO Profiles

Items: 20

1.
Value/Rank Plot

ykgE - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgE, cysteine-rich LutA family protein; putative electron transport chain YkgEFG component
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgE_b0306_st (ID_REF), GDS1400, b0306 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673711

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

ykgF - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgF, ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgF_b0307_st (ID_REF), GDS1400, b0307 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673712

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

rclR - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
rclR, reactive chlorine species (RCS)-specific activator of the rcl genes
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgD_b0305_st (ID_REF), GDS1400, b0305 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673710

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

ykgG - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgG, LutC family protein; putative electron transport chain YkgEFG component
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgG_b0308_st (ID_REF), GDS1400, b0308 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673713

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

rclA - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
rclA, reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgC_b0304_st (ID_REF), GDS1400, b0304 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673709

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

ykgH - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgH, putative inner membrane protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgH_b0310_st (ID_REF), GDS1400, b0310 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673714

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

ykgI - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgI, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, b0302_st (ID_REF), GDS1400, 914440 (Gene ID), 945658 (Gene ID), 957190 (Gene ID), b0302 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13666810

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

rclB - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
rclB, reactive chlorine species (RCS) stress resistance periplasmic protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgI_b0303_st (ID_REF), GDS1400, b0303 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673715

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

rclC - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
rclC, reactive chlorine species (RCS) stress resistance inner membrane protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgB_b0301_st (ID_REF), GDS1400, b0301 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673708

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

betA - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
betA, choline dehydrogenase, a flavoprotein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, betA_b0311_st (ID_REF), GDS1400, b0311 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13667409

GEO DataSets Gene Chromosome neighbors

11.
Value/Rank Plot

ykgA - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgA, pseudo
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgA_b0300_f_st (ID_REF), GDS1400, b0300 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673707

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

betB - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
betB, betaine aldehyde dehydrogenase, NAD-dependent
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, betB_b0312_st (ID_REF), GDS1400, b0312 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13667410

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

betI - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
betI, choline-inducible betIBA-betT divergent operon transcriptional repressor
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, betI_b0313_st (ID_REF), GDS1400, b0313 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13667411

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

eaeH - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
eaeH, pseudo
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, eaeH_b0297_st (ID_REF), GDS1400, b0297 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13667674

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

betT - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
betT, choline transporter of high affinity
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, betT_b0314_st (ID_REF), GDS1400, b0314 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13667412

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

ykgM - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgM, 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgM_b0296_st (ID_REF), GDS1400, b0296 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673719

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

rpmJ - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
rpmJ, 50S ribosomal protein L36 (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, IG_197_311564_313580_fwd_st (ID_REF), GDS1400, 1450238 (Gene ID), 2693818 (Gene ID), IG_197_311564_313580_fwd_st (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13669279

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

ykgL - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ykgL, uncharacterized protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ykgL_b0295_st (ID_REF), GDS1400, b0295 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673718

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

yahA - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
yahA, c-di-GMP-specific phosphodiesterase
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, yahA_b0315_st (ID_REF), GDS1400, b0315 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13672389

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

yahB - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
yahB, putative DNA-bindng transcriptional regulator
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, yahB_b0316_st (ID_REF), GDS1400, b0316 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13672390

GEO DataSets Gene Profile neighbors Chromosome neighbors

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