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Links from GEO Profiles

Items: 20

1.
Value/Rank Plot

paaC - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaC, ring 1,2-phenylacetyl-CoA epoxidase subunit
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbP_b1390_at (ID_REF), GDS3123, 945956 (Gene ID), b1390 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312681

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

paaB - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaB, putative ring 1,2-phenylacetyl-CoA epoxidase subunit
Organism:
Escherichia coli K-12
Reporter:
GPL199, ynbF_b1389_at (ID_REF), GDS3123, 947595 (Gene ID), b1389 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49313668

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

paaD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaD, ring 1,2-phenylacetyl-CoA epoxidase subunit
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1391_at (ID_REF), GDS3123, 945959 (Gene ID), b1391 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306834

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

paaA - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaA, ring 1,2-phenylacetyl-CoA epoxidase subunit
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbO_b1388_at (ID_REF), GDS3123, 945833 (Gene ID), b1388 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312680

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

paaE - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaE, ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1392_at (ID_REF), GDS3123, 945962 (Gene ID), b1392 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306835

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

paaF - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaF, 2,3-dehydroadipyl-CoA hydratase
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbS_b1393_at (ID_REF), GDS3123, 946011 (Gene ID), b1393 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312682

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

paaZ - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaZ, oxepin-CoA hydrolase and 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase
Organism:
Escherichia coli K-12
Reporter:
GPL199, maoC_b1387_at (ID_REF), GDS3123, 945954 (Gene ID), b1387 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311157

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

paaG - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaG, 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1394_at (ID_REF), GDS3123, 946263 (Gene ID), b1394 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306836

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

paaH - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaH, 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbU_b1395_at (ID_REF), GDS3123, 945940 (Gene ID), b1395 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312683

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

paaI - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaI, hydroxyphenylacetyl-CoA thioesterase
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1396_at (ID_REF), GDS3123, 945265 (Gene ID), b1396 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306837

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

tynA - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
tynA, tyramine oxidase, copper-requiring
Organism:
Escherichia coli K-12
Reporter:
GPL199, tynA_b1386_at (ID_REF), GDS3123, 945939 (Gene ID), b1386 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312073

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

paaJ - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaJ, 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1397_at (ID_REF), GDS3123, 946121 (Gene ID), b1397 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306838

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

paaK - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaK, phenylacetyl-CoA ligase
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1398_at (ID_REF), GDS3123, 945963 (Gene ID), b1398 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306839

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

feaB - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
feaB, phenylacetaldehyde dehydrogenase
Organism:
Escherichia coli K-12
Reporter:
GPL199, feaB_b1385_at (ID_REF), GDS3123, 945933 (Gene ID), b1385 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49307649

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

paaX - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
paaX, transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1399_at (ID_REF), GDS3123, 945966 (Gene ID), b1399 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306840

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

feaR - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
feaR, transcriptional activator for tynA and feaB
Organism:
Escherichia coli K-12
Reporter:
GPL199, feaR_b1384_at (ID_REF), GDS3123, 945941 (Gene ID), b1384 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49307650

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

ydbL - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ydbL, DUF1318 family protein
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbL_b1383_at (ID_REF), GDS3123, 945943 (Gene ID), b1383 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312679

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

ynbE - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ynbE, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ynbE_b1382_at (ID_REF), GDS3123, 1035632 (Gene ID), 945946 (Gene ID), b1382 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49313667

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

ydbH - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ydbH, putative membrane-anchored protein, function unknown
Organism:
Escherichia coli K-12
Reporter:
GPL199, ydbH_b1381_at (ID_REF), GDS3123, 945949 (Gene ID), b1381 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312677

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

ldhA - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ldhA, D-lactate dehydrogenase (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ldhA_b1380_at (ID_REF), GDS3123, 1035630 (Gene ID), 917202 (Gene ID), 946315 (Gene ID), 961014 (Gene ID), b1380 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311080

GEO DataSets Gene Profile neighbors Chromosome neighbors

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