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Items: 1 to 20 of 55

1.
Value/Rank Plot

ygbF - Heat shock factor sigma32 overexpression: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3500, 13_15_9 (ID_REF), GDS1804, b2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 16 samples
ID:
20214689

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

ygbF - Ampicillin treatment: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3503, 2754 (ID_REF), GDS2579, B2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35522354

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

ygbF - Calcium chloride and glycerol wash effect: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3503, 2754 (ID_REF), GDS2578, B2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35517754

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

ygbF - Arginine regulon repression and derepression

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3154, 1763303_at (ID_REF), GDS2427, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, count, 9 samples
ID:
32388490

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

ygbF - Anaerobic to aerobic transition: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL534, 2.3.9.16 (ID_REF), GDS2364, b2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
30883888

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

ygbF - Escherichia coli response to the arylamide compound PMX 10070: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3154, 1763303_at (ID_REF), GDS4815, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, count, 18 samples
ID:
104127490

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

ygbF - Novobiocin treatment: dose response

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3503, 2754 (ID_REF), GDS2599, B2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
35614354

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

ygbF - Multiple bactericidal antibiotics

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1763303_at (ID_REF), GDS5160, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, transformed count, 18 samples
ID:
116035990

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

ygbF - DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ygbF_b2754_st (ID_REF), GDS1399, b2754 (ORF)
DataSet type:
Expression profiling by array, transformed count, 12 samples
ID:
13665488

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

ygbF - NOX overexpressing cells at various growth rates

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3503, 2754 (ID_REF), GDS2592, B2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35582154

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

PF_RS05610 - Hyperthermophilic archaeon Pyrococcus furiosus response to gamma irradiation: time course

Annotation:
PF_RS05610, CRISPR-associated endonuclease Cas2
Organism:
Pyrococcus furiosus
Reporter:
GPL3926, ID-3829 (ID_REF), GDS2469, PF1117 (ORF)
DataSet type:
Expression profiling by array, log10 ratio, 21 samples
ID:
33254429

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

ygbF - Frag1 cells response to ionic and non-ionic hyperosmotic stress

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3154, 1763303_at (ID_REF), GDS3421, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
56475690

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

ygbF - UV exposure time course (ecoli_8.0)

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL18, 2423 (ID_REF), GDS100, B2754 (ORF)
DataSet type:
Expression profiling by array, log ratio, 8 samples
ID:
572921

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

ygbF - Kanamycin treatment: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3503, 2754 (ID_REF), GDS2583, B2754 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35540754

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

ygbF - Cisplatin effect on DNA adenine methyltransferase and mismatch repair mutants

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL73, ygbF_b2754_st (ID_REF), GDS1400, b2754 (ORF)
DataSet type:
Expression profiling by array, transformed count, 24 samples
ID:
13673088

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

ygbF - Hydrogen peroxide-scavenging enzymes AhpCF, KatE and KatG deficiency

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1763303_at (ID_REF), GDS5163, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
116093890

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

PF_RS05610 - Hyperthermophilic archaeon Pyrococcus furiosus response to gamma irradiation: time course

Annotation:
PF_RS05610, CRISPR-associated endonuclease Cas2
Organism:
Pyrococcus furiosus
Reporter:
GPL3926, ID-5268 (ID_REF), GDS2469, PF1117 (ORF)
DataSet type:
Expression profiling by array, log10 ratio, 21 samples
ID:
33255868

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

ygbF - DNA gyrase inhibition effect on recA, topA, and dnaC mutants: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL1436, 4075 (ID_REF), GDS1963, b2754 (ORF)
DataSet type:
Expression profiling by array, log ratio, 16 samples
ID:
22757075

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

ygbF - Increased cell membrane saturated fatty acid effect on Escherichia coli

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli
Reporter:
GPL3154, 1763303_at (ID_REF), GDS3597, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, count, 6 samples
ID:
61897790

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

ygbF - Escherichia coli O157:H7 response to cinnamaldehyde: time course

Annotation:
ygbF, CRISPR adaptation ssRNA endonuclease
Organism:
Escherichia coli, Escherichia coli O157:H7
Reporter:
GPL3154, 1763303_at (ID_REF), GDS4321, 947213 (Gene ID), b2754 (ORF)
DataSet type:
Expression profiling by array, transformed count, 8 samples
ID:
87604690

GEO DataSets Gene Profile neighbors Chromosome neighbors

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