GTR Test Accession:
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GTR000320609.1
Registered in GTR:
2013-01-21
View version history
GTR000320609.1,
registered in GTR:
2013-01-21
Last annual review date for the lab: 2021-11-15
Past due
LinkOut
At a Glance
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment
Conditions (1):
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3 beta-Hydroxysteroid dehydrogenase deficiency
Genes (1):
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HSD3B2 (1p12)
Methods (1):
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Molecular Genetics - Sequence analysis of the entire coding region: Bi-directional Sanger Sequence Analysis
Target population: Help
Salt wasting forms of congenital adrenal hyperplasia
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Test short name:
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HSD3B2
Specimen Source:
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- Amniocytes
- Amniotic fluid
- Cell culture
- Cell-free DNA
- Chorionic villi
- Cord blood
- Dried blood spot (DBS) card
- Fetal blood
- Fibroblasts
- Isolated DNA
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Physician
Lab contact:
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Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Please send EDTA blood or genomic DNA at room temperature with suitable mail or transportation service, preferentially at the beginning of the week. Please specify request, include contact address and phone number of refering physician, confirmation of informed consent and payment, and for shipments from outside the European Union custom …
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Confirmation of research findings
Result interpretation
Confirmation of research findings
Result interpretation
Test additional service:
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Custom Prenatal Testing
Custom mutation-specific/Carrier testing
Custom mutation-specific/Carrier testing
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Yes
Test strategy:
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For index cases sequence analysis entire coding region and flanking splice sites For carrier or prenatal testing please include mutation report, indicate relationship within family for index case and probands to be tested Each identified mutation will be confirmed by independant PCR and sequencing or RFLP of new DNA preparation …
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Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Test Order Code
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument
Sequence analysis of the entire coding region
Bi-directional Sanger Sequence Analysis
Applied Biosystems 3500xL Genetic Analyzer
Clinical Information
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment
Target population:
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Salt wasting forms of congenital adrenal hyperplasia
View citations (1)
- Congenital adrenal hyperplasia due to 3beta-hydroxysteroid dehydrogenase/Delta(5)-Delta(4) isomerase deficiency. Simard J, et al. Semin Reprod Med. 2002;20(3):255-76. doi:10.1055/s-2002-35373. PMID: 12428206.
Variant Interpretation:
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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Yes.
Yes.
Will the lab re-contact the ordering physician if variant interpretation changes?
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Yes.
Yes.
Recommended fields not provided:
Clinical validity,
Clinical utility,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Confirmation:
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independent confirmation with new PCR product from new DNA preparation or diluation of the provided DNA sample, preferentially by RFLP or sequencing in both directions
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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sensitivity and specificity sequencing > 95%
Assay limitations:
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sequence analysis will not detect heterozygous exon deletions or duplications
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Inter-Laboratory
PT Provider: Help
testing of samples with mutations identified in other lab
Yes
Method used for proficiency testing: Help
Inter-Laboratory
PT Provider: Help
testing of samples with mutations identified in other lab
Recommended fields not provided:
Citations to support assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
Not Applicable
Additional Information
Reviews:
Clinical resources:
Molecular resources:
IMPORTANT NOTE:
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NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.