GTR Test Accession:
Help
GTR000571330.2
CAP
Last updated in GTR:
2020-03-03
View version history
GTR000571330.2,
last updated:
2020-03-03
GTR000571330.1,
registered in GTR:
2020-02-27
Last annual review date for the lab: 2022-12-28
Past due
LinkOut
At a Glance
Test purpose:
Help
Diagnosis;
Risk Assessment
Conditions (4):
Help
Homocystinuria due to methylene tetrahydrofolate reductase deficiency;
Congenital plasminogen activator inhibitor type 1 deficiency;
MTHFR THERMOLABILE POLYMORPHISM
more...
Genes (3):
Help
F5 (1q24.2);
MTHFR (1p36.22);
SERPINE1 (7q22.1)
Methods (2):
Help
Molecular Genetics - Targeted variant analysis: Hologic Invader; SNP Detection
Target population: Help
Not provided
Clinical validity:
Help
Not provided
Clinical utility:
Help
Not provided
Ordering Information
Offered by:
Help
Specimen Source:
Help
- Peripheral (whole) blood
Who can order: Help
- Health Care Provider
CPT codes:
Help
Informed consent required:
Help
Decline to answer
Pre-test genetic counseling required:
Help
Decline to answer
Post-test genetic counseling required:
Help
Decline to answer
Recommended fields not provided:
Test Order Code,
How to Order,
Lab contact for this test,
Contact policy,
Test strategy,
Test development
Conditions
Help
Total conditions: 4
Condition/Phenotype | Identifier |
---|
Test Targets
Genes
Help
Total genes: 3
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
---|
Methodology
Total methods: 2
Method Category
Help
Test method
Help
Instrument *
Targeted variant analysis
Hologic Invader
Targeted variant analysis
SNP Detection
* Instrument: Not provided
Clinical Information
Test purpose:
Help
Diagnosis;
Risk Assessment
Recommended fields not provided:
Clinical validity,
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
Help
Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
Help
Analytic sensitivity and specificity > 99%
Proficiency testing (PT):
Is proficiency testing performed for this test?
Help
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
Help
Not provided
Additional Information
Clinical resources:
Molecular resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.