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Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D, mRNA (cDNA clone MGC:151445 IMAGE:40126387), complete cds

GenBank: BC117068.1

FASTA Graphics 

LOCUS       BC117068                1025 bp    mRNA    linear   ROD 18-MAR-2009
DEFINITION  Mus musculus TATA box binding protein (Tbp)-associated factor, RNA
            polymerase I, D, mRNA (cDNA clone MGC:151445 IMAGE:40126387),
            complete cds.
ACCESSION   BC117068
VERSION     BC117068.1
KEYWORDS    MGC.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1025)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2006) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Ambion
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCK Plate: 1 Row: O Column: 4.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /clone="MGC:151445 IMAGE:40126387"
                     /tissue_type="Brain, PCR rescued clones"
                     /clone_lib="NIH_MGC_378"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: GGTTGCCG"
     gene            1..1025
                     /gene="Taf1d"
                     /gene_synonym="2810003M17Rik"
                     /gene_synonym="5930426I11Rik"
                     /gene_synonym="TAF(I)41"
                     /gene_synonym="TAFI41"
                     /db_xref="GeneID:75316"
                     /db_xref="MGI:MGI:1922566"
     CDS             29..997
                     /gene="Taf1d"
                     /gene_synonym="2810003M17Rik"
                     /gene_synonym="5930426I11Rik"
                     /gene_synonym="TAF(I)41"
                     /gene_synonym="TAFI41"
                     /codon_start=1
                     /product="TATA box binding protein (Tbp)-associated
                     factor, RNA polymerase I, D"
                     /protein_id="AAI17069.1"
                     /db_xref="GeneID:75316"
                     /db_xref="MGI:MGI:1922566"
                     /translation="MAQSEVNSVCVASDRAGDTGDQSDDSSDGSLFKTQCAPSPIQKQ
                     RHPTVKRVTLPASVETDSSSDSSIEPRPLTLKAIFERFKKKKRKKRKKRKYEPKLRPR
                     GRPRGKPSGTRITRRSQIDAKQIKDKGAVFPFLESESGRKPLPWKKILTYEQAVARGF
                     FHHIEKLKYEHHLKECLKQMHAGEDLEKEDLDSRRHKYMDDDGSLSPIEEPLTEDEAT
                     NPQAECDIKLVEDSCFIISSEFSRKRNLEQEKIKKESTFSKKAKDATHREKGHRRTLK
                     GNEHVTIEEDSRPQPRPFAHLQSKVMKKGELEYLEVHHLCGLSQPL"
ORIGIN      
        1 agaaaattgg gaaaggccgc gaaaagtgat ggctcaatca gaagtgaatt ctgtctgtgt
       61 ggcatcggat agagctggag atactggaga ccaaagtgat gactcctctg atggcagctt
      121 atttaaaact cagtgtgctc cttcacctat acaaaagcaa agacacccta ctgtgaaacg
      181 tgttacttta cctgcaagtg ttgaaacaga ttcatcaagt gactcttcta tagaaccaag
      241 gcctctgact ttaaaggcta tttttgaaag atttaaaaaa aagaaacgga aaaagaggaa
      301 aaagagaaaa tatgagccaa aattaagacc aagaggaaga ccaagaggaa aaccatcggg
      361 aacgaggatc actagaaggt cgcaaataga tgcaaaacaa attaaagaca aaggagctgt
      421 gtttccattc ttagaatctg agagtggaag aaaaccttta ccttggaaga aaattttaac
      481 atatgagcaa gctgttgcaa gaggattttt tcaccacatt gaaaaactca agtatgaaca
      541 ccaccttaag gaatgcttga agcaaatgca tgctggggaa gatttagaaa aggaagacct
      601 tgacagtcgg aggcacaaat acatggatga tgatggttca ctttctccta ttgaagagcc
      661 attaactgaa gatgaagcaa caaatcctca ggctgaatgt gatatcaagt tggttgaaga
      721 cagttgcttc ataataagtt cagaattctc aaggaagaga aacttggaac aagagaagat
      781 taagaaagaa tctacatttt ctaaaaaagc caaagatgcc acacacagag agaaagggca
      841 cagaagaacc ttgaaaggaa atgaacatgt gactattgaa gaagattcaa gaccccagcc
      901 tcgccctttt gctcatctgc agagcaaggt catgaagaaa ggagagttag agtatctgga
      961 ggttcaccac ctctgtggtc tgtcgcagcc actatgacta tgaggaggaa gagatgattt
     1021 gaaaa
//
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