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NCBI Reference Sequence: XM_019771397.1
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LOCUS XM_019771397 2958 bp mRNA linear INV 28-DEC-2016 DEFINITION PREDICTED: Branchiostoma belcheri sorting nexin-2-like (LOC109471916), transcript variant X1, mRNA. ACCESSION XM_019771397 VERSION XM_019771397.1 DBLINK BioProject: PRJNA358734 KEYWORDS RefSeq. SOURCE Branchiostoma belcheri (Belcher's lancelet) ORGANISM Branchiostoma belcheri Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017803865.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Branchiostoma belcheri Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2958 /organism="Branchiostoma belcheri" /mol_type="mRNA" /isolate="BF01" /isolation_source="seawater" /db_xref="taxon:7741" /chromosome="Unknown" /sex="male" /cell_type="sperm cells" /tissue_type="gonad" /dev_stage="adult" /geo_loc_name="China: Xiamen Bay" /collection_date="Aug-2008" /breed="outbred" gene 1..2958 /gene="LOC109471916" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:109471916" CDS 43..1992 /gene="LOC109471916" /codon_start=1 /product="sorting nexin-2-like isoform X1" /protein_id="XP_019626956.1" /db_xref="GeneID:109471916" /translation="MADDREPPPLFDDEKPDKKEDEDDLFATPNEAPKEEVKDEPASL PTEPAQDKSEDLFAADDDLFGEKQEGVKEVDTSKLLRKLTEDVDDLSPVEEPKPLIPT AADSGKAPQSDTSGKKESPKEKAKEEDSQAKEPKPKEVPASMAKDQSPLKPMKVSVDL HAPKPAQNMQEDSADSPKLEVTDEPPPEMDISGEGEEVDLDSPETEGPSSPAKMEPDS DSSPLEAPPMAEVLPPAKPVPEEKPKPTPAPRKPSMEKSKEEIEEEESGDQFTLDIKV HDPGKVGDGMGAYMSYKVTTQTSIPAFRRPSMTVTRRFSDFLGLHEKLSQKHVHVGRI VPPAPEKSVVGMTKIKMSKEDTSSTEFVEKRRALLERFLQRISIHPVLQMDPDFRDFL EQDELPRATSTSAVSGAGVLRLIKGVGDTLSKVTIKMDESDQWFEEKQNQVEALDQQL KKLHASVEALVTYRKELGISTAAFAKSTAMLSNSEEHTALSRALSQLAEVEEKIEQVH LEQADNDFFLLSELLKDYIGIIQSIRVVFHERVKSFHNWQNAQQNLAKKREQEAKFKQ TGKTDKIAQAQEEIREWEGKVEKGREDFEEISKTIRTEIRRFETNRVKDFRNIIIKYM ETLMNSQQQLIKYWEGFLPEAKAIA" ORIGIN 1 agcggtgtgc atgctaatca catgaccgca tagtcatcca acatggcgga cgatagggag 61 ccacctcctc tttttgacga cgagaaaccc gacaagaaag aagacgagga tgacttgttt 121 gcgactccta atgaggcgcc caaggaagag gtaaaagatg agccagccag cctgcccacg 181 gagcctgccc aggacaagtc tgaggacctg ttcgctgcag acgatgacct atttggagag 241 aaacaggaag gtgtgaagga ggttgacacg tcaaagcttc ttcggaaact cacggaagat 301 gtagacgacc tctcacctgt agaggaacca aagcctctca ttccgacagc agcagattcg 361 ggcaaagcac cccaaagtga tacatctgga aaaaaggaat ctccaaaaga aaaagcaaag 421 gaggaagatt cacaggccaa ggaacccaag cctaaggaag tgccagccag tatggcaaag 481 gaccagtctc cgctgaaacc tatgaaagtc tctgtagacc ttcatgcccc caaacctgca 541 caaaacatgc aggaagactc cgctgactcg cccaaactgg aagttactga cgagcctcct 601 cctgagatgg acatctctgg agaaggtgag gaggttgacc tggactcccc cgagacggag 661 ggcccctcca gcccggccaa gatggagcct gactcagact cctcccccct ggaggccccc 721 cccatggcgg aggtgctccc ccctgccaaa cctgtccccg aggagaaacc caagccgacc 781 cccgccccac gcaaaccctc catggagaaa tccaaggaag agattgagga agaagaaagt 841 ggagaccagt ttactttgga catcaaggtg catgatcctg ggaaagttgg tgatggtatg 901 ggggcctaca tgagttataa agtcaccact cagactagca ttccagcgtt caggcgcccc 961 agcatgacag tcacgcgacg attcagcgac ttcctcggtc ttcacgagaa actctcgcag 1021 aaacacgtcc acgtgggccg catcgtgcca cctgctcctg agaagagcgt tgttggtatg 1081 actaagatca agatgtccaa ggaagacacc agctccactg agtttgtgga gaagaggagg 1141 gccctcctgg aaaggttcct gcagagaata agtatccacc cagtccttca gatggaccca 1201 gacttcaggg acttcctgga acaggatgag ctgccgcgtg ccaccagtac ctcggcggtg 1261 agcggcgcgg gcgtgctgcg actgatcaag ggcgtgggcg acaccctgtc caaggtcacc 1321 atcaagatgg acgagtcgga ccagtggttc gaggagaaac agaaccaggt ggaggctctg 1381 gaccagcagc tgaagaagct acacgccagc gtggaggccc tggtcaccta caggaaagag 1441 cttggtatca gcacggcagc ctttgcgaag agcacagcca tgctgagtaa cagtgaggaa 1501 cacacggccc tgtcccgcgc cctgtcccag ctcgctgagg tcgaggagaa gattgaacag 1561 gttcatttgg agcaggcaga caatgatttc ttcctgctgt ctgaactcct gaaggactac 1621 atcggaatca tccagtccat tagggttgtc ttccacgagc gagtgaagag tttccacaac 1681 tggcagaacg cccagcagaa cctggccaag aagcgggaac aggaggccaa gttcaaacag 1741 acgggcaaga ccgacaagat cgcccaggca caggaggaga tcagagagtg ggaaggaaag 1801 gtggagaagg gccgagaaga cttcgaggag atctccaaga caatccgcac agagatcagg 1861 aggtttgaga ccaaccgtgt gaaagatttc cgcaacatta tcatcaagta catggaaaca 1921 ctcatgaaca gtcagcaaca gcttatcaag tactgggaag ggttcctccc tgaagccaaa 1981 gccatcgcat agacctgctc acaagacggt ggaaacatag agaaccaaca attaagcaga 2041 gaatcaacca attaaaatca actgcagatc tacacgtagt attagaaatg atcttgattc 2101 agactgttgg cattgatact atagatgtgt ataaagatac gtagcattag ataaatgtgc 2161 ctgttgaagt ttgtcctaag gagggggtcg taacagtaca aaaatgtatg taacagcaca 2221 gtttctagat tatcagaaat atgtaaatga atttgactca ccaggatttt cgaacaaagc 2281 tctcggtctt catggaaaat ttttgtgagt caaattcttt tgagttggag aacagtttat 2341 ttctcaatat gtcaattacc aactcagatg aactttcatg ctaatttccc atatgctcct 2401 aaaccctcct tagaatttgc ctcaacttgt ggataaccag tggatattca agcatctgtc 2461 attttttcaa tgctttcagt gtgctgattt gaatttctac agttgatcaa aagagatatt 2521 tgtattttgc atacatgtat gtctgtatgg ctgacaccat gatgattaat taacacaatt 2581 cagtacaagt tagccttaaa tagcattcct tgaggcttta tattattgaa tatatcagat 2641 aataatgact ccgtaagtgg aaactaatag ttgtgatttt ggtatcagtg agggaaaaat 2701 agcttcaggc tcttgccatt ccaacatagc aacaaatgaa ttgtaagctg agttttcttt 2761 ctgtttttgt aaggaagtga aatgaaacat tactttcaga ctggcatctg tcaatcacag 2821 aatattagtt cattatgaga gtggctgttt tccaggtgat tcatcgaagt aaaatgtcac 2881 tggtctcctc taaccaaaat gcacgcaaca gttacatgta ggtatcttca cagaataaag 2941 agctcagcaa acaacttt //
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