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GenBank: AJ276126.3
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LOCUS AJ276126 921 bp mRNA linear ROD 26-JUL-2016 DEFINITION Rattus norvegicus partial mRNA for RT1-El protein. ACCESSION AJ276126 VERSION AJ276126.3 KEYWORDS rt1-El gene. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 AUTHORS McLaren,F.H. JOURNAL Thesis (2000) Laboratory of Functinnal Immunogenetics, The Babraham Institute, Cambridge, U.K REFERENCE 2 AUTHORS Solier,C., McLaren,F., Amadou,C., Le Bouteiller,P. and Joly,E. TITLE Detection of transcripts for a soluble form of the RT1-E MHC class Ib molecule in rat placenta JOURNAL Immunogenetics 53 (4), 351-356 (2001) PUBMED 11491540 REFERENCE 3 AUTHORS McLaren,F.H. TITLE Direct Submission JOURNAL Submitted (29-FEB-2000) McLaren F.H., Laboratory of Functinnal Immunogenetics, The Babraham Institute, Babraham Hall, Cambridge, CB2 4AT, UNITED KINGDOM REMARK revised by [3] REFERENCE 4 (bases 1 to 921) AUTHORS Joly,E. TITLE Direct Submission JOURNAL Submitted (13-SEP-2001) Joly E., Unite CNRS UPR 2163, CHU Purpan, 31300 Toulouse, FRANCE COMMENT On Sep 16, 2001 this sequence version replaced AJ276126.2. FEATURES Location/Qualifiers source 1..921 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="Lewis" /db_xref="taxon:10116" /chromosome="20" /clone="15gem" /cell_type="neural stem cells" /tissue_type="brain striatum" /dev_stage="embryo" /note="mRNA was extracted from neurospheres prepared from E16 striatum. These had been in culture for 1 week." gene <1..921 /gene="rt1-El" CDS <1..921 /gene="rt1-El" /note="putative soluble class I molecule" /citation=[2] /codon_start=1 /product="RT1-El protein" /protein_id="CAB86228.2" /db_xref="GOA:Q9JJU7" /db_xref="HSSP:1JF1" /db_xref="InterPro:IPR001039" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR010579" /db_xref="InterPro:IPR011161" /db_xref="InterPro:IPR011162" /db_xref="InterPro:IPR013783" /db_xref="UniProtKB/TrEMBL:Q9JJU7" /translation="GSHSLRYFHTAVSRPGLREPRFVIVGYVDHTEFVRYDSDAENPR YEQRARWMEREGPEYWEQQTQIVKGHEWSFRVSLRNLLGYYNQSEGGSHTLQVMSGCD MGSDRSLRRGYEQYAYDGRDYISLNEDLKTWSAADLAAQITLNKWDQAGELDYYKTYL EGPCLEWLLRYLEHGKETLMRSDPPKAHVTLHPRHEGDVTLRCWALGFYPADITLTWQ LNGEDLTQDMELVETRPAGDGTFQKWASVVVPLGKEQKYTCLVEHEGLPEPLTLRWAF LLTSGKGVYTPAPGRDSSQSSDVSLPDCKA" mat_peptide 1..918 /gene="rt1-El" /product="RT1-El" /citation=[2] ORIGIN 1 ggctcacact cgctgcggta tttccacacc gccgtgtcca ggcccggcct ccgggagccc 61 cggttcgtta tcgtcggcta tgtggaccac acggagttcg tgcgctacga cagcgacgca 121 gagaatccga gatacgagca gcgggcgcgg tggatggagc gggaggggcc ggagtattgg 181 gagcagcaga cacagatcgt caagggacac gaatggagtt tccgagtgag cctgaggaat 241 ctgctaggct actacaacca gagcgagggc ggctctcaca cgctccaggt gatgtctgga 301 tgtgacatgg ggtctgaccg gagcctgcgc cgcgggtatg agcaatacgc ctatgacggc 361 cgcgattaca tctctctgaa cgaagacctg aagacgtggt cggctgcgga cttggcagca 421 cagatcactc taaacaagtg ggatcaggct ggtgaattag actattacaa gacctacctg 481 gagggtccat gcctggagtg gcttctcaga tacctggagc acgggaagga gacactgatg 541 cgctcagatc ccccaaaggc acatgtgacc cttcacccca gacatgaagg tgatgtgacc 601 ctgaggtgct gggccctggg cttctaccct gctgacatca ccctgacctg gcagttgaat 661 ggggaggacc tgacccagga catggagctt gtggagacca ggcctgcagg ggatggaacc 721 ttccagaagt gggcatctgt ggtggtgcct cttgggaaag agcagaagta cacatgcctt 781 gtagaacatg aggggctgcc tgagcctctt accttgagat gggcttttct tctcacaagt 841 ggaaaaggag tttacacccc tgctccaggc agggacagct cccagagctc tgatgtgtct 901 ctcccagatt gtaaagcatg a //
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