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NCBI Reference Sequence: NM_001380369.1
FASTA Graphics
LOCUS NM_001380369 2541 bp mRNA linear INV 04-DEC-2024 DEFINITION Caenorhabditis elegans FYVE, RhoGEF and PH domain-containing protein tag-77 (tag-77), partial mRNA. ACCESSION NM_001380369 VERSION NM_001380369.1 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2541) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2541) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2541) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (17-OCT-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2541) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2541 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene <1..>2541 /gene="tag-77" /locus_tag="CELE_C28C12.10" /db_xref="GeneID:177656" /db_xref="WormBase:WBGene00006450" CDS 1..2541 /gene="tag-77" /locus_tag="CELE_C28C12.10" /standard_name="C28C12.10f" /note="Confirmed by transcript evidence" /codon_start=1 /product="FYVE, RhoGEF and PH domain-containing protein tag-77" /protein_id="NP_001368458.1" /db_xref="GeneID:177656" /db_xref="WormBase:WBGene00006450" /translation="MGFVPRMQNGGTGTPSERPISQVSTLSQVSDEFDEGDTSASDEE SMNSEKHLRRHRHEDDFDELPLPKNERKTTTVAATHSEIMNEMEHLFVRGGKKNNGVH KQQRRQSNIDEIPSDVGKLRDNRKGRHNSLFVSPTSGMSSSSTDDFSRITSMTSDRSS ILTSHSGGEDSTDGASPVPDYETGDEKDDQRLKKLHYAAVEFLKVQNNYVQYLKEMAV LYPEYMERFGKRVGRDLLASHNGHENVVLQIKKIMVQILPIHEMLLKEIDKVCSNWDS RYPNMSKTIGTFADFLKCCQPFLDNKADFLNKLLQLRNEDKEFDEATYMFETEVFKRG KKGAVIQQLDQVHQNFMRYKLLMLRYSEYLIDDCDEKEKAQEAIQKLENVTQAVNQKM GLPTTEELTKLYYRFQCQFNVLEPGRVLIRQSEVMKQTRKELQPRYLVLFTDYLWICR VSSSGQFDINRSYRIPLEYMKFERMEEDERIRCLQIRSRVKSALIIFSSEKERNQWTD DLTKAQYDRKSYKRRQSTAVQRHDENKKKMNKLLMLTPEVPDASDLERPQLIDSRSRS MSCESQDELSSVPVTPLDNGEIDETLGFGEVTRNGSGKKPPSEMIKPVWLPDNISNEC LMEGCSTEFNIINRRHHCRDCGWLICKFCKGQAPLSKYDFTKQNVCSECFDRHYKAYK DGVLFPSKNMIVQSDETILVKIGKRNDKEIVDPRKLFKAPVNYGFRHRNVEEKRAQSI VFGRVYLRSRKTETVRHALLRRDDLKLVFYKAELDSKSVLELLIYGYFYRETPLDDGW LFELVHRNQIRTDDTKDDVISFRVDNSASAKKWSAAFADKLELDPTRG" ORIGIN 1 atgggattcg taccaagaat gcaaaatgga ggaactggaa ctccgtccga aagaccaatt 61 tcccaagttt ctacattatc tcaagttagc gacgaatttg acgaaggtga tacatcagct 121 tcagatgaag aatcaatgaa tagtgaaaag catcttcgac gtcatcgaca cgaggatgat 181 ttcgatgagc tcccacttcc aaaaaatgaa cggaaaacga caactgttgc agctacacat 241 tcagaaatta tgaacgaaat ggagcatctc tttgtgagag gtggtaaaaa gaataatgga 301 gttcacaaac aacagagacg ccaatcgaat atcgatgaaa ttccatcaga cgtgggaaaa 361 ctgagagata atcgaaaagg tcgtcacaat tccttatttg tttctccaac ttctggaatg 421 tcatcatctt cgacagatga tttctcaaga atcacaagta tgacaagtga tcgtagcagt 481 attttaacaa gtcatagtgg cggagaagac tctactgatg gagcatcacc tgtgccagat 541 tatgagactg gagatgagaa ggatgatcaa cgattgaaga aacttcatta tgctgctgtt 601 gagtttttga aagttcagaa taattatgtg caatatttaa aggaaatggc agtgctctat 661 ccggaataca tggaacgatt tggtaaacga gttggacgag atcttctagc ttcacacaat 721 ggtcatgaaa atgttgtttt acaaatcaag aaaataatgg ttcaaatact gccaatccat 781 gaaatgcttc taaaagaaat tgataaagta tgttcgaatt gggattctcg atatccgaat 841 atgagcaaga ctattggaac ttttgccgat ttcttgaaat gttgtcaacc attccttgat 901 aataaagccg actttttgaa taagctgctt cagttaagaa atgaagataa agaatttgac 961 gaagcaactt atatgttcga gacagaagtg tttaaacgtg gaaagaaagg ggctgtaatc 1021 caacaactcg atcaagttca tcaaaatttc atgagataca agcttttaat gcttcggtat 1081 tcagaatatt tgatagatga ctgtgatgaa aaggaaaaag ctcaggaagc cattcagaag 1141 ctggaaaatg tgacacaggc ggtaaatcag aaaatgggcc taccgacgac cgaggagctg 1201 acaaaattgt actatcgatt ccagtgtcaa ttcaatgtgc tcgaacccgg acgtgtgtta 1261 attcgtcaat cagaagtgat gaaacagact cgaaaagaat tacaacctcg atatctcgtc 1321 ctattcactg actatctttg gatttgtcga gtgagctcat ctgggcaatt tgatataaat 1381 cgttcctacc gtataccatt ggaatatatg aagtttgaga gaatggaaga ggatgaacga 1441 atacggtgtc tacaaattag aagtcgtgtt aaaagtgcct taatcatatt ttcatcggaa 1501 aaagagagaa atcaatggac agatgatctt acaaaagcgc aatacgatcg gaaatcttat 1561 aaaagaaggc aatcaacagc tgtgcaaaga catgatgaga ataagaagaa aatgaacaaa 1621 cttttaatgt tgacacctga agtaccagat gccagtgatc ttgaaagacc tcaattaatt 1681 gattcaagat caagatcaat gagttgtgaa tcacaagatg aactttcttc agttccagta 1741 acacctttgg ataatggaga aattgatgaa actcttggat ttggtgaagt aactcgaaat 1801 ggatcaggaa aaaagccgcc ctcggaaatg atcaaacctg tttggcttcc ggataatata 1861 tcaaatgaat gtttaatgga gggatgctca actgagttca atataattaa taggcggcat 1921 cattgtagag attgtggatg gctgatctgc aaattttgca aagggcaagc tccactgtcg 1981 aaatatgact ttacgaaaca aaatgtttgc tccgagtgtt ttgatcggca ttacaaagct 2041 tacaaagacg gtgttctatt cccatctaaa aatatgatag tccaaagtga tgaaactatt 2101 cttgtgaaaa ttggaaaacg caacgacaaa gaaattgtgg atccaagaaa attgttcaag 2161 gcacccgtca attatggatt ccggcatcga aatgttgagg aaaaacgggc acagagcatt 2221 gtgtttggca gggtttattt gagaagtcga aaaaccgaga ctgtccgcca tgctcttctt 2281 cgtcgtgatg atcttaaact ggtattctac aaagcagaac ttgactcaaa atctgttcta 2341 gaattgctca tttatggata tttctaccgg gaaacaccac ttgatgatgg atggttattt 2401 gagcttgtac atcggaatca aataagaact gatgatacca aagatgacgt catttccttc 2461 cgtgtcgaca acagtgcaag tgcaaaaaag tggtcggcag catttgcgga taaacttgag 2521 ttggatccta ctcgcggctg a //
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