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Caenorhabditis elegans Tyrosine-protein phosphatase domain-containing protein (F38H4.4), mRNA

NCBI Reference Sequence: NM_069842.5

FASTA Graphics 

LOCUS       NM_069842               1648 bp    mRNA    linear   INV 04-DEC-2024
DEFINITION  Caenorhabditis elegans Tyrosine-protein phosphatase
            domain-containing protein (F38H4.4), mRNA.
ACCESSION   NM_069842
VERSION     NM_069842.5
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1648)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1648)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2024) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1648)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003282).
            
            On Feb 2, 2021 this sequence version replaced NM_069842.4.
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="IV"
     gene            1..1648
                     /gene="F38H4.4"
                     /locus_tag="CELE_F38H4.4"
                     /db_xref="GeneID:178115"
                     /db_xref="WormBase:WBGene00009548"
     CDS             34..1539
                     /gene="F38H4.4"
                     /locus_tag="CELE_F38H4.4"
                     /standard_name="F38H4.4"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Tyrosine-protein phosphatase domain-containing
                     protein"
                     /protein_id="NP_502243.1"
                     /db_xref="GeneID:178115"
                     /db_xref="WormBase:WBGene00009548"
                     /translation="MDANGPIVKHNVPQTPQTPTPHKKKHAKHHGGKHHRKSRSGKKK
                     TGFLCCRGKKRRKSRKGHGKSKSTAHKQPRSKVVKPLPPVVNEQLGDVVLVKNLERSK
                     SFPIQQLPGAPQSPNKVTPSKASKETDKDDKLQKSKSKTKLDEKSDNNKDIKDEKKDD
                     KKEGKKEEKKDEKKDDDGNTEEKKQKWLGLAKRFVDEDANIAANDFEQVVSYIPPSVT
                     KHQFVKNMHKNRFADVICLDHSKVHLSDSSYIHASYLELDTQKRAILTQLPLPHTSAD
                     FWQMIIEQRVKCVLLLLTDSEYDSLGGDFVFPRNQDFLNFEERSIRVGEFKRVEIMDG
                     WVLKVVSVSNGDYKSFLHIHHYNAWPHNNIPGNGSPKFVKQIWQLQSVLRKYSPSTPT
                     VYMSLSGCGRAGTFALFETAHLSLHSEQATLDLVKCLEMVRNGRIHACQNLTQFSFVY
                     TLLAEHILDNGFCKLAIPKKPNDEKDKEKDKENEDEINVQMILRQLVINKC"
ORIGIN      
        1 acaaaatttg caaatttcaa gaaactccga agcatggatg caaatggacc aattgtgaag
       61 cacaacgtcc cgcaaacgcc acaaacaccg actcctcata agaagaaaca tgccaaacat
      121 cacgggggga agcaccacag aaagtcgcgt tccggaaaga agaagaccgg attcttgtgc
      181 tgtcgtggca aaaaacgtag aaagtcaagg aaaggacatg gtaaatctaa atccacggct
      241 cataagcagc cacgttcgaa ggtcgtgaag ccattgccac cagtcgttaa tgagcaactt
      301 ggcgatgtag ttctcgtgaa gaatctagaa agaagtaagt cattcccaat ccaacaactt
      361 cctggagctc cacagtctcc gaacaaagtg acaccttcga aggcttccaa ggagacagat
      421 aaggatgata agctacaaaa gagcaagtca aagaccaagt tagatgaaaa gtcggataat
      481 aataaggaca ttaaagatga gaaaaaagat gataagaaag agggaaagaa ggaagaaaag
      541 aaggatgaga aaaaagatga tgatggaaat acagaagaga agaagcaaaa atggttagga
      601 ttggcaaagc gattcgtgga tgaggatgcc aacattgcag ctaatgattt tgaacaagtt
      661 gtcagctaca tcccacctag cgtcaccaaa catcagttcg tgaaaaacat gcacaaaaat
      721 cgatttgccg acgttatttg ccttgatcat tcgaaagttc acttgtcaga ttcatcgtat
      781 atccatgcga gttatttaga acttgacact cagaaacggg caattctaac tcaactgcca
      841 ttgccgcaca catctgcaga cttctggcaa atgattatag agcaacgtgt caagtgtgtg
      901 ctccttttgc tcaccgactc tgaatatgat agtttgggag gggatttcgt gtttccgagg
      961 aatcaagatt ttctaaattt cgaagaacgt tcaatcagag ttggagagtt caaacgtgtt
     1021 gagattatgg atggatgggt tctgaaagtt gttagtgtta gtaatggaga ctacaagtca
     1081 ttccttcaca tccaccacta caatgcatgg cctcacaaca atatacccgg aaatggatct
     1141 ccaaagtttg tgaaacagat ttggcagctt caatcagttc ttcgcaagta ctctccatca
     1201 actccaactg tatacatgag tctgtctgga tgtggaagag ctggcacatt tgccttgttc
     1261 gagaccgccc atctttctct tcacagtgag caggctacat tggatctggt taagtgcttg
     1321 gagatggttc gcaatggacg catacatgct tgtcagaatc tgactcagtt ttcttttgtc
     1381 tacacacttt tggctgagca tatactggat aatgggtttt gcaaattggc cattccgaaa
     1441 aagccaaatg acgaaaagga taaagagaaa gataaggaaa atgaagatga gattaacgtt
     1501 cagatgatcc tccgtcaact tgtgatcaat aaatgctgat tataactctg caactatttt
     1561 ctggtatcat gaagcattgt atttctccga tttttatttc ttcatagata ttaatgcccc
     1621 tggttttcat caataaaatt ttgtattt
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for Tyrosine-protein phosphatase domain-containing protein (NP_502243.1).

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