U.S. flag

An official website of the United States government

PREDICTED: Homo sapiens myosin binding protein C1 (MYBPC1), transcript variant X4, mRNA

NCBI Reference Sequence: XM_054372094.1

FASTA Graphics 

LOCUS       XM_054372094            3977 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens myosin binding protein C1 (MYBPC1),
            transcript variant X4, mRNA.
ACCESSION   XM_054372094
VERSION     XM_054372094.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060936) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..3977
                     /gene="MYBPC1"
                     /gene_synonym="CMYO16; CMYP16; LCCS4; MYBPCC; MYBPCS;
                     MYOTREM; ssMyBP-C"
                     /note="myosin binding protein C1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 241
                     ESTs, 390 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     7 samples with support for all annotated introns"
                     /db_xref="GeneID:4604"
                     /db_xref="HGNC:HGNC:7549"
                     /db_xref="MIM:160794"
     CDS             101..3631
                     /gene="MYBPC1"
                     /gene_synonym="CMYO16; CMYP16; LCCS4; MYBPCC; MYBPCS;
                     MYOTREM; ssMyBP-C"
                     /codon_start=1
                     /product="myosin-binding protein C, slow-type isoform X4"
                     /protein_id="XP_054228069.1"
                     /db_xref="GeneID:4604"
                     /db_xref="HGNC:HGNC:7549"
                     /db_xref="MIM:160794"
                     /translation="MPEPTKKEENEVPAPAPPPEEPSKEKEAGTTPAKDEEEVSPPSA
                     LPPGLGSRALERKDSDWTLVETPPGEEQAKQNANSQLSILFIEKPQGGTVKVGEDITF
                     IAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN
                     FAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDIRSAFKRREVKQQEEEPQVDVWE
                     LLKNAKPSEYEKIAFQYGITDLRGMLKRLKRMRREEKKSAAFAKILDPAYQVDKGGRV
                     RFVVELADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGD
                     EKCSTELFVREPPIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPK
                     SRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSVDLKPLKILTPLTDQTV
                     NLGKEICLKCEISENIPGKWTKNGLPVQESDRLKVVHKGRIHKLVIANALTEDEGDYV
                     FAPDAYNVTLPAKVHVIDPPKIILDGLDADNTVTVIAGNKLRLEIPISGEPPPKAMWS
                     RGDKAIMEGSGRIRTESYPDSSTLVIDIAERDDSGVYHINLKNEAGEAHASIKVKVVD
                     FPDPPVAPTVTEVGDDWCIMNWEPPAYDGGSPILGYFIERKKKQSSRWMRLNFDLCKE
                     TTFEPKKMIEGVAYEVRIFAVNAIGISKPSMPSRPFVPLAVTSPPTLLTVDSVTDTTV
                     TMRWRPPDHIGAAGLDGYVLEYCFEGSTSAKQSDENGEAAYDLPAEDWIVANKDLIDK
                     TKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYI
                     RRVGEAVNLVIPFQGKPRPELTWKKDGAEIDKNQINIRNSETDTIIFIRKAERSHSGK
                     YDLQVKVDKFVETASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGY
                     TIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESA
                     VIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGYNATLNCSVRGNPKPKITWMK
                     NKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVKGGL
                     SFCRLLLQGVPPNIIDSYLRDLHSSNPEEY"
ORIGIN      
        1 gtcacaccga cctgcaccat ctctctcctg cctgtggggt ttctgtcaac tagtcgtgga
       61 gggaaggaga ctctttaaag aataacatct tattgtggcc atgccagaac ccactaagaa
      121 agaggaaaat gaagtgccag ccccagcccc acccccggaa gaaccaagta aagagaagga
      181 ggccggaact acaccagcaa aagatgaaga ggaagtctcc ccgcctagcg ccttgcctcc
      241 aggtttgggt agtcgggccc tggagagaaa agattcagac tggacccttg tcgaaactcc
      301 tcctggggag gaacaagcca agcagaatgc caactcccag ctgtccatct tgttcattga
      361 aaaacctcaa ggaggaacag tgaaagttgg tgaagatatc accttcatag ccaaagtcaa
      421 ggctgaagat cttctgagaa aacccactat caaatggttc aaaggaaaat ggatggacct
      481 ggccagcaaa gccgggaagc accttcagct gaaggaaacc tttgagaggc acagtcgggt
      541 gtacacattt gagatgcaga tcatcaaggc caaagataac tttgcaggaa attacagatg
      601 cgaggtcacc tataaggata agtttgacag ctgttcattt gatcttgaag tgcacgaatc
      661 tactgggact actccaaaca ttgacatcag atctgctttc aagagaaggg aggtgaagca
      721 gcaggaggaa gaaccccagg tggacgtatg ggagttgctg aagaacgcga aacccagtga
      781 gtacgagaag atcgccttcc agtatggaat caccgacctg cgcggcatgc tcaagcgact
      841 caagcgcatg cgcagagagg agaagaagag cgcagctttt gcaaaaattc ttgatcctgc
      901 atatcaggtt gacaaaggag gcagagtgag gtttgttgtg gagctggcag atccaaagtt
      961 ggaggtgaaa tggtataaaa atggtcaaga aattcgaccc agtaccaaat acatctttga
     1021 acacaaagga tgccagagaa tcctgtttat caataactgt cagatgacag atgattcaga
     1081 gtattatgtg acagccggtg atgagaaatg ttccactgag ctcttcgtaa gagagcctcc
     1141 aattatggtg accaaacagc tggaagatac aactgcttat tgtggggaga gagtggaatt
     1201 agaatgtgag gtgtctgaag atgatgccaa tgtaaaatgg tttaagaatg gtgaagagat
     1261 tatccctggt ccaaaatcaa gataccgaat tagagttgag ggtaaaaaac acatcttgat
     1321 catagaggga gcaacaaagg ctgatgctgc agaatattca gtaatgacaa caggaggaca
     1381 atcatctgct aaacttagtg ttgacttgaa acctctgaag attttgacac ctctgactga
     1441 tcagactgta aatcttggaa aagaaatctg cctgaagtgt gaaatctctg aaaacatacc
     1501 aggaaaatgg actaaaaatg gcctacctgt tcaggagagt gaccgtctaa aggtggttca
     1561 caagggaagg atccacaagt tagtgatagc caatgccctc actgaagatg aaggtgatta
     1621 tgtatttgca cctgatgcct acaatgttac tctgcctgcc aaagttcatg ttattgatcc
     1681 tcctaagatc atcctggatg gtcttgatgc tgacaacaca gtgacagtga ttgcaggaaa
     1741 caagcttcgt cttgagatcc ccatcagcgg agaaccacct cctaaagcca tgtggagccg
     1801 gggagataag gctattatgg aaggcagtgg ccggataaga acagaatctt accctgatag
     1861 cagcactctg gtcattgata tagctgaaag agatgactct ggtgtttacc acatcaatct
     1921 gaaaaacgaa gctggagagg cacatgcaag catcaaggtt aaagttgtgg acttccctga
     1981 tcctccagtg gcaccgactg tgacagaggt gggagatgac tggtgtatca tgaactggga
     2041 gcctcctgcc tacgacggag gctctccaat cctaggatat tttattgaga ggaagaagaa
     2101 acaaagctcc aggtggatga ggctgaattt tgatctctgc aaagaaacaa cttttgagcc
     2161 caagaagatg attgaaggtg tggcctatga ggtccgcatc tttgcagtca atgccattgg
     2221 catctccaag cccagtatgc cctccaggcc ttttgttcct ttggctgtaa caagccctcc
     2281 tactcttctg actgtggact ctgtcactga cacgactgtc acgatgaggt ggcgcccccc
     2341 agaccacatt ggtgcagcag gtttagatgg ctatgtgcta gagtattgct ttgaaggaag
     2401 tacatcagca aaacagtctg atgaaaatgg ggaggctgcc tatgatctgc cagctgagga
     2461 ctggatagtt gcaaacaaag atctgattga caagacgaag ttcaccatca caggtctgcc
     2521 aacagatgca aagatctttg tgcgtgtgaa ggctgttaat gcagctggtg ccagcgagcc
     2581 caagtactat tctcagccca ttctcgtgaa ggaaatcata gaacctccaa agattcgcat
     2641 cccaagacac ctgaagcaaa cctatatccg cagagttgga gaagctgtca atctggttat
     2701 acctttccag ggaaaaccaa gaccagaatt aacttggaag aaggatggtg cagaaattga
     2761 taagaatcaa ataaacattc gcaactctga gactgataca atcatattta ttagaaaagc
     2821 agagaggagc cactctggga aatatgatct gcaagtcaaa gtggacaaat tcgtggagac
     2881 cgcatcaatt gacatccaga tcattgaccg tccaggtcca ccccaaattg tgaagattga
     2941 ggatgtctgg ggagaaaatg tcgctctcac atggactcca ccaaaggatg atggaaatgc
     3001 tgctatcaca ggctatacca ttcagaaggc tgacaagaag agcatggaat ggtttactgt
     3061 cattgagcat tatcatcgaa ccagtgccac cattactgaa ttggtcatag ggaatgaata
     3121 ttacttccgg gtcttttctg aaaacatgtg tggcctcagt gaggatgcca ccatgactaa
     3181 agagagtgca gtgatcgcca gggatggtaa aatctacaaa aatccagtgt atgaagactt
     3241 tgatttctca gaggcaccca tgtttactca gcctttggtt aacacctatg ccatagctgg
     3301 ttacaatgcc accctaaact gcagtgtgag aggaaatcct aagcctaaaa taacctggat
     3361 gaaaaacaaa gttgctattg tggatgatcc aagatacagg atgttcagca accagggagt
     3421 ctgtaccctg gaaattcgca agcccagccc ctatgatgga ggcacttact gctgcaaagc
     3481 agtcaatgac cttgggacag tggagattga atgcaaactg gaggtgaaag gtgggctctc
     3541 cttctgcaga ctcctcttgc aaggcgtacc tccaaacata attgattcat atctgcgaga
     3601 cttacactca agcaatcctg aggaatactg agggagggcc tggctactgt ctctctgcac
     3661 tctgctgctt tgaaatctgg ttgaaatgag aaaaagcatt ttctgttttc ccaccaggcc
     3721 cccaagtgtg gtctttttct ttcctcctaa tgttgaagag aaaaaaaaaa aaaaaagttt
     3781 gcccagattg cttaattaaa aattgcaaac aaaatctcat ttgaagtcag cactttggtc
     3841 attattatct ctgctcactg tattatactt tacaaaaatg caagtcatag aataagcaaa
     3901 agcagttatt tttgtttaca tagtaggcta taaatgcttt ttttttcctc tcagagtaaa
     3961 aaacataaca caatgca
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.