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NCBI Reference Sequence: XM_054372094.1
FASTA Graphics
LOCUS XM_054372094 3977 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens myosin binding protein C1 (MYBPC1), transcript variant X4, mRNA. ACCESSION XM_054372094 VERSION XM_054372094.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060936) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3977 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="12" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..3977 /gene="MYBPC1" /gene_synonym="CMYO16; CMYP16; LCCS4; MYBPCC; MYBPCS; MYOTREM; ssMyBP-C" /note="myosin binding protein C1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 241 ESTs, 390 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns" /db_xref="GeneID:4604" /db_xref="HGNC:HGNC:7549" /db_xref="MIM:160794" CDS 101..3631 /gene="MYBPC1" /gene_synonym="CMYO16; CMYP16; LCCS4; MYBPCC; MYBPCS; MYOTREM; ssMyBP-C" /codon_start=1 /product="myosin-binding protein C, slow-type isoform X4" /protein_id="XP_054228069.1" /db_xref="GeneID:4604" /db_xref="HGNC:HGNC:7549" /db_xref="MIM:160794" /translation="MPEPTKKEENEVPAPAPPPEEPSKEKEAGTTPAKDEEEVSPPSA LPPGLGSRALERKDSDWTLVETPPGEEQAKQNANSQLSILFIEKPQGGTVKVGEDITF IAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN FAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDIRSAFKRREVKQQEEEPQVDVWE LLKNAKPSEYEKIAFQYGITDLRGMLKRLKRMRREEKKSAAFAKILDPAYQVDKGGRV RFVVELADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGD EKCSTELFVREPPIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPK SRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSVDLKPLKILTPLTDQTV NLGKEICLKCEISENIPGKWTKNGLPVQESDRLKVVHKGRIHKLVIANALTEDEGDYV FAPDAYNVTLPAKVHVIDPPKIILDGLDADNTVTVIAGNKLRLEIPISGEPPPKAMWS RGDKAIMEGSGRIRTESYPDSSTLVIDIAERDDSGVYHINLKNEAGEAHASIKVKVVD FPDPPVAPTVTEVGDDWCIMNWEPPAYDGGSPILGYFIERKKKQSSRWMRLNFDLCKE TTFEPKKMIEGVAYEVRIFAVNAIGISKPSMPSRPFVPLAVTSPPTLLTVDSVTDTTV TMRWRPPDHIGAAGLDGYVLEYCFEGSTSAKQSDENGEAAYDLPAEDWIVANKDLIDK TKFTITGLPTDAKIFVRVKAVNAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYI RRVGEAVNLVIPFQGKPRPELTWKKDGAEIDKNQINIRNSETDTIIFIRKAERSHSGK YDLQVKVDKFVETASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGY TIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMCGLSEDATMTKESA VIARDGKIYKNPVYEDFDFSEAPMFTQPLVNTYAIAGYNATLNCSVRGNPKPKITWMK NKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVKGGL SFCRLLLQGVPPNIIDSYLRDLHSSNPEEY" ORIGIN 1 gtcacaccga cctgcaccat ctctctcctg cctgtggggt ttctgtcaac tagtcgtgga 61 gggaaggaga ctctttaaag aataacatct tattgtggcc atgccagaac ccactaagaa 121 agaggaaaat gaagtgccag ccccagcccc acccccggaa gaaccaagta aagagaagga 181 ggccggaact acaccagcaa aagatgaaga ggaagtctcc ccgcctagcg ccttgcctcc 241 aggtttgggt agtcgggccc tggagagaaa agattcagac tggacccttg tcgaaactcc 301 tcctggggag gaacaagcca agcagaatgc caactcccag ctgtccatct tgttcattga 361 aaaacctcaa ggaggaacag tgaaagttgg tgaagatatc accttcatag ccaaagtcaa 421 ggctgaagat cttctgagaa aacccactat caaatggttc aaaggaaaat ggatggacct 481 ggccagcaaa gccgggaagc accttcagct gaaggaaacc tttgagaggc acagtcgggt 541 gtacacattt gagatgcaga tcatcaaggc caaagataac tttgcaggaa attacagatg 601 cgaggtcacc tataaggata agtttgacag ctgttcattt gatcttgaag tgcacgaatc 661 tactgggact actccaaaca ttgacatcag atctgctttc aagagaaggg aggtgaagca 721 gcaggaggaa gaaccccagg tggacgtatg ggagttgctg aagaacgcga aacccagtga 781 gtacgagaag atcgccttcc agtatggaat caccgacctg cgcggcatgc tcaagcgact 841 caagcgcatg cgcagagagg agaagaagag cgcagctttt gcaaaaattc ttgatcctgc 901 atatcaggtt gacaaaggag gcagagtgag gtttgttgtg gagctggcag atccaaagtt 961 ggaggtgaaa tggtataaaa atggtcaaga aattcgaccc agtaccaaat acatctttga 1021 acacaaagga tgccagagaa tcctgtttat caataactgt cagatgacag atgattcaga 1081 gtattatgtg acagccggtg atgagaaatg ttccactgag ctcttcgtaa gagagcctcc 1141 aattatggtg accaaacagc tggaagatac aactgcttat tgtggggaga gagtggaatt 1201 agaatgtgag gtgtctgaag atgatgccaa tgtaaaatgg tttaagaatg gtgaagagat 1261 tatccctggt ccaaaatcaa gataccgaat tagagttgag ggtaaaaaac acatcttgat 1321 catagaggga gcaacaaagg ctgatgctgc agaatattca gtaatgacaa caggaggaca 1381 atcatctgct aaacttagtg ttgacttgaa acctctgaag attttgacac ctctgactga 1441 tcagactgta aatcttggaa aagaaatctg cctgaagtgt gaaatctctg aaaacatacc 1501 aggaaaatgg actaaaaatg gcctacctgt tcaggagagt gaccgtctaa aggtggttca 1561 caagggaagg atccacaagt tagtgatagc caatgccctc actgaagatg aaggtgatta 1621 tgtatttgca cctgatgcct acaatgttac tctgcctgcc aaagttcatg ttattgatcc 1681 tcctaagatc atcctggatg gtcttgatgc tgacaacaca gtgacagtga ttgcaggaaa 1741 caagcttcgt cttgagatcc ccatcagcgg agaaccacct cctaaagcca tgtggagccg 1801 gggagataag gctattatgg aaggcagtgg ccggataaga acagaatctt accctgatag 1861 cagcactctg gtcattgata tagctgaaag agatgactct ggtgtttacc acatcaatct 1921 gaaaaacgaa gctggagagg cacatgcaag catcaaggtt aaagttgtgg acttccctga 1981 tcctccagtg gcaccgactg tgacagaggt gggagatgac tggtgtatca tgaactggga 2041 gcctcctgcc tacgacggag gctctccaat cctaggatat tttattgaga ggaagaagaa 2101 acaaagctcc aggtggatga ggctgaattt tgatctctgc aaagaaacaa cttttgagcc 2161 caagaagatg attgaaggtg tggcctatga ggtccgcatc tttgcagtca atgccattgg 2221 catctccaag cccagtatgc cctccaggcc ttttgttcct ttggctgtaa caagccctcc 2281 tactcttctg actgtggact ctgtcactga cacgactgtc acgatgaggt ggcgcccccc 2341 agaccacatt ggtgcagcag gtttagatgg ctatgtgcta gagtattgct ttgaaggaag 2401 tacatcagca aaacagtctg atgaaaatgg ggaggctgcc tatgatctgc cagctgagga 2461 ctggatagtt gcaaacaaag atctgattga caagacgaag ttcaccatca caggtctgcc 2521 aacagatgca aagatctttg tgcgtgtgaa ggctgttaat gcagctggtg ccagcgagcc 2581 caagtactat tctcagccca ttctcgtgaa ggaaatcata gaacctccaa agattcgcat 2641 cccaagacac ctgaagcaaa cctatatccg cagagttgga gaagctgtca atctggttat 2701 acctttccag ggaaaaccaa gaccagaatt aacttggaag aaggatggtg cagaaattga 2761 taagaatcaa ataaacattc gcaactctga gactgataca atcatattta ttagaaaagc 2821 agagaggagc cactctggga aatatgatct gcaagtcaaa gtggacaaat tcgtggagac 2881 cgcatcaatt gacatccaga tcattgaccg tccaggtcca ccccaaattg tgaagattga 2941 ggatgtctgg ggagaaaatg tcgctctcac atggactcca ccaaaggatg atggaaatgc 3001 tgctatcaca ggctatacca ttcagaaggc tgacaagaag agcatggaat ggtttactgt 3061 cattgagcat tatcatcgaa ccagtgccac cattactgaa ttggtcatag ggaatgaata 3121 ttacttccgg gtcttttctg aaaacatgtg tggcctcagt gaggatgcca ccatgactaa 3181 agagagtgca gtgatcgcca gggatggtaa aatctacaaa aatccagtgt atgaagactt 3241 tgatttctca gaggcaccca tgtttactca gcctttggtt aacacctatg ccatagctgg 3301 ttacaatgcc accctaaact gcagtgtgag aggaaatcct aagcctaaaa taacctggat 3361 gaaaaacaaa gttgctattg tggatgatcc aagatacagg atgttcagca accagggagt 3421 ctgtaccctg gaaattcgca agcccagccc ctatgatgga ggcacttact gctgcaaagc 3481 agtcaatgac cttgggacag tggagattga atgcaaactg gaggtgaaag gtgggctctc 3541 cttctgcaga ctcctcttgc aaggcgtacc tccaaacata attgattcat atctgcgaga 3601 cttacactca agcaatcctg aggaatactg agggagggcc tggctactgt ctctctgcac 3661 tctgctgctt tgaaatctgg ttgaaatgag aaaaagcatt ttctgttttc ccaccaggcc 3721 cccaagtgtg gtctttttct ttcctcctaa tgttgaagag aaaaaaaaaa aaaaaagttt 3781 gcccagattg cttaattaaa aattgcaaac aaaatctcat ttgaagtcag cactttggtc 3841 attattatct ctgctcactg tattatactt tacaaaaatg caagtcatag aataagcaaa 3901 agcagttatt tttgtttaca tagtaggcta taaatgcttt ttttttcctc tcagagtaaa 3961 aaacataaca caatgca //
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