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GenBank: JAWLAP000000000.1
LOCUS JAWLAP010000000 23 rc DNA linear ENV 20-AUG-2024 DEFINITION MAG: Marinicella sp. isolate AC1.116, whole genome shotgun sequencing project. ACCESSION JAWLAP000000000 VERSION JAWLAP000000000.1 DBLINK BioProject: PRJNA974210 BioSample: SAMN37790460 KEYWORDS WGS; ENV; Metagenome Assembled Genome; MAG. SOURCE Marinicella sp. (wastewater metagenome) ORGANISM Marinicella sp. Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Marinicella. REFERENCE 1 (bases 1 to 23) AUTHORS Wang,D. TITLE Assembly and interactions of prokaryotic and viral communities in a full-scale biofilm wastewater treatment system JOURNAL Unpublished REFERENCE 2 (bases 1 to 23) AUTHORS Wang,D. TITLE Direct Submission JOURNAL Submitted (16-OCT-2023) Civil Engineering, The University of Hong Kong, Pokfulam road, Hong Kong 999077, China COMMENT The Marinicella sp. whole genome shotgun (WGS) project has the project accession JAWLAP000000000. This version of the project (01) has the accession number JAWLAP010000000, and consists of sequences JAWLAP010000001-JAWLAP010000023. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. v2.9-b1768 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 3x Sequencing Technology :: Oxford Nanopore GridION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/19/2023 20:03:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,303 CDSs (total) :: 3,256 Genes (coding) :: 3,238 CDSs (with protein) :: 3,238 Genes (RNA) :: 47 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 40 ncRNAs :: 4 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 10 of 18 Pseudo Genes (incomplete) :: 10 of 18 Pseudo Genes (internal stop) :: 4 of 18 Pseudo Genes (multiple problems) :: 6 of 18 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..23 /organism="Marinicella sp." /mol_type="genomic DNA" /isolate="AC1.116" /isolation_source="wastewater treatment plant" /db_xref="taxon:1955066" /environmental_sample /geo_loc_name="China: Hong Kong" /lat_lon="22.2827 N 114.1368 E" /collection_date="2020-03-19" /metagenome_source="wastewater metagenome" /note="metagenomic" WGS JAWLAP010000001-JAWLAP010000023 //
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