LOCUS NM_001179271 321 bp mRNA linear PLN 17-DEC-2024
DEFINITION Saccharomyces cerevisiae S288C ribosomal 60S subunit protein L42B
(RPL42B), partial mRNA.
ACCESSION NM_001179271
VERSION NM_001179271.1
DBLINK BioProject: PRJNA128
KEYWORDS RefSeq.
SOURCE Saccharomyces cerevisiae S288C
ORGANISM Saccharomyces cerevisiae S288C
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Saccharomycetaceae;
Saccharomyces.
REFERENCE 1 (bases 1 to 321)
AUTHORS Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M.,
Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S.,
Weng,S. and Cherry,J.M.
TITLE New data and collaborations at the Saccharomyces Genome Database:
updated reference genome, alleles, and the Alliance of Genome
Resources
JOURNAL Genetics 220 (4) (2022)
PUBMED 34897464
REFERENCE 2 (bases 1 to 321)
AUTHORS Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B.,
Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M.,
Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and
Oliver,S.G.
TITLE Life with 6000 genes
JOURNAL Science 274 (5287), 546 (1996)
PUBMED 8849441
REFERENCE 3 (bases 1 to 321)
AUTHORS Johnston,M., Andrews,S., Brinkman,R., Cooper,J., Ding,H., Dover,J.,
Du,Z., Favello,A., Fulton,L., Gattung,S. et al.
TITLE Complete nucleotide sequence of Saccharomyces cerevisiae chromosome
VIII
JOURNAL Science 265 (5181), 2077-2082 (1994)
PUBMED 8091229
REFERENCE 4 (bases 1 to 321)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 5 (bases 1 to 321)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2012) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
REMARK Protein update by submitter
REFERENCE 6 (bases 1 to 321)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2011) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
REMARK Sequence update by submitter
REFERENCE 7 (bases 1 to 321)
CONSRTM Saccharomyces Genome Database
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2009) Department of Genetics, Stanford
University, Stanford, CA 94305-5120, USA
COMMENT REVIEWED REFSEQ: This record has been curated by SGD. This record
is derived from an annotated genomic sequence (NC_001140).
##Genome-Annotation-Data-START##
Annotation Provider :: SGD
Annotation Status :: Full Annotation
Annotation Version :: R64-4-1
URL :: http://www.yeastgenome.org/
##Genome-Annotation-Data-END##
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..321
/organism="Saccharomyces cerevisiae S288C"
/mol_type="mRNA"
/strain="S288C"
/db_xref="taxon:559292"
/chromosome="VIII"
gene <1..>321
/gene="RPL42B"
/locus_tag="YHR141C"
/gene_synonym="MAK18"
/db_xref="GeneID:856544"
CDS 1..321
/gene="RPL42B"
/locus_tag="YHR141C"
/gene_synonym="MAK18"
/experiment="EXISTENCE:curator inference:GO:0002181
cytoplasmic translation [PMID:11983894]"
/experiment="EXISTENCE:curator inference:GO:0003735
structural constituent of ribosome [PMID:11983894]"
/experiment="EXISTENCE:direct assay:GO:0022625 cytosolic
large ribosomal subunit [PMID:11983894]"
/note="Ribosomal 60S subunit protein L42B; required for
propagation of the killer toxin-encoding M1
double-stranded RNA satellite of the L-A double-stranded
RNA virus; homologous to mammalian ribosomal protein L36A,
no bacterial homolog; RPL42B has a paralog, RPL42A, that
arose from the whole genome duplication"
/codon_start=1
/product="ribosomal 60S subunit protein L42B"
/protein_id="NP_012010.1"
/db_xref="GeneID:856544"
/db_xref="SGD:S000001183"
/translation="MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYD
RKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQ
ALQF"
ORIGIN
1 atggttaacg tcccaaagac cagaaagacc tactgtaagg gtaagacctg tcgtaagcac
61 actcaacaca aggttactca atacaaagct ggtaaggctt ccttgttcgc tcaaggtaag
121 agacgttatg accgtaaaca atctggtttc ggtggtcaaa ccaagcctgt tttccacaag
181 aaagctaaga ctaccaagaa ggttgttttg agattggaat gtgtcaaatg taagactaga
241 gcccaattaa ccttgaagag atgtaagcac ttcgaattgg gtggtgaaaa gaagcaaaag
301 ggtcaagctt tgcaattctg a
//