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Saccharomyces cerevisiae S288C ribosomal 60S subunit protein L42B (RPL42B), partial mRNA

NCBI Reference Sequence: NM_001179271.1

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LOCUS       NM_001179271             321 bp    mRNA    linear   PLN 17-DEC-2024
DEFINITION  Saccharomyces cerevisiae S288C ribosomal 60S subunit protein L42B
            (RPL42B), partial mRNA.
ACCESSION   NM_001179271
VERSION     NM_001179271.1
DBLINK      BioProject: PRJNA128
KEYWORDS    RefSeq.
SOURCE      Saccharomyces cerevisiae S288C
  ORGANISM  Saccharomyces cerevisiae S288C
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Saccharomycetaceae;
            Saccharomyces.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M.,
            Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S.,
            Weng,S. and Cherry,J.M.
  TITLE     New data and collaborations at the Saccharomyces Genome Database:
            updated reference genome, alleles, and the Alliance of Genome
            Resources
  JOURNAL   Genetics 220 (4) (2022)
   PUBMED   34897464
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B.,
            Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M.,
            Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and
            Oliver,S.G.
  TITLE     Life with 6000 genes
  JOURNAL   Science 274 (5287), 546 (1996)
   PUBMED   8849441
REFERENCE   3  (bases 1 to 321)
  AUTHORS   Johnston,M., Andrews,S., Brinkman,R., Cooper,J., Ding,H., Dover,J.,
            Du,Z., Favello,A., Fulton,L., Gattung,S. et al.
  TITLE     Complete nucleotide sequence of Saccharomyces cerevisiae chromosome
            VIII
  JOURNAL   Science 265 (5181), 2077-2082 (1994)
   PUBMED   8091229
REFERENCE   4  (bases 1 to 321)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-DEC-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 321)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2012) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Protein update by submitter
REFERENCE   6  (bases 1 to 321)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2011) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
  REMARK    Sequence update by submitter
REFERENCE   7  (bases 1 to 321)
  CONSRTM   Saccharomyces Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2009) Department of Genetics, Stanford
            University, Stanford, CA 94305-5120, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by SGD. This record
            is derived from an annotated genomic sequence (NC_001140).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: SGD
            Annotation Status   :: Full Annotation
            Annotation Version  :: R64-4-1
            URL                 :: http://www.yeastgenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Saccharomyces cerevisiae S288C"
                     /mol_type="mRNA"
                     /strain="S288C"
                     /db_xref="taxon:559292"
                     /chromosome="VIII"
     gene            <1..>321
                     /gene="RPL42B"
                     /locus_tag="YHR141C"
                     /gene_synonym="MAK18"
                     /db_xref="GeneID:856544"
     CDS             1..321
                     /gene="RPL42B"
                     /locus_tag="YHR141C"
                     /gene_synonym="MAK18"
                     /experiment="EXISTENCE:curator inference:GO:0002181
                     cytoplasmic translation [PMID:11983894]"
                     /experiment="EXISTENCE:curator inference:GO:0003735
                     structural constituent of ribosome [PMID:11983894]"
                     /experiment="EXISTENCE:direct assay:GO:0022625 cytosolic
                     large ribosomal subunit [PMID:11983894]"
                     /note="Ribosomal 60S subunit protein L42B; required for
                     propagation of the killer toxin-encoding M1
                     double-stranded RNA satellite of the L-A double-stranded
                     RNA virus; homologous to mammalian ribosomal protein L36A,
                     no bacterial homolog; RPL42B has a paralog, RPL42A, that
                     arose from the whole genome duplication"
                     /codon_start=1
                     /product="ribosomal 60S subunit protein L42B"
                     /protein_id="NP_012010.1"
                     /db_xref="GeneID:856544"
                     /db_xref="SGD:S000001183"
                     /translation="MVNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYD
                     RKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQ
                     ALQF"
ORIGIN      
        1 atggttaacg tcccaaagac cagaaagacc tactgtaagg gtaagacctg tcgtaagcac
       61 actcaacaca aggttactca atacaaagct ggtaaggctt ccttgttcgc tcaaggtaag
      121 agacgttatg accgtaaaca atctggtttc ggtggtcaaa ccaagcctgt tttccacaag
      181 aaagctaaga ctaccaagaa ggttgttttg agattggaat gtgtcaaatg taagactaga
      241 gcccaattaa ccttgaagag atgtaagcac ttcgaattgg gtggtgaaaa gaagcaaaag
      301 ggtcaagctt tgcaattctg a
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for ribosomal 60S subunit protein L42B (NP_012010.1).

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