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Mus musculus strain C57BL/6J peroxisomal biogenesis factor 5-like protein transcript variant 10 (Pex5l) mRNA, complete cds, alternatively spliced

GenBank: HQ646195.1

FASTA Graphics 

LOCUS       HQ646195                3394 bp    mRNA    linear   ROD 19-JUN-2011
DEFINITION  Mus musculus strain C57BL/6J peroxisomal biogenesis factor 5-like
            protein transcript variant 10 (Pex5l) mRNA, complete cds,
            alternatively spliced.
ACCESSION   HQ646195
VERSION     HQ646195.1
KEYWORDS    .
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Lewis,A.S., Schwartz,E., Chan,C.S., Noam,Y., Shin,M., Wadman,W.J.,
            Surmeier,D.J., Baram,T.Z., Macdonald,R.L. and Chetkovich,D.M.
  TITLE     Alternatively spliced isoforms of TRIP8b differentially control h
            channel trafficking and function
  JOURNAL   J. Neurosci. 29 (19), 6250-6265 (2009)
   PUBMED   19439603
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Chetkovich,D.M. and Lewis,A.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2010) Ruth & Ken Davee Department of Neurology
            and Clinical Neuroscience, Northwestern University Feinberg School
            of Medicine, 303 E Chicago Ave, Ward 10-201, Chicago, IL 60611, USA
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /tissue_type="brain"
     gene            1..3394
                     /gene="Pex5l"
     CDS             256..2133
                     /gene="Pex5l"
                     /note="alternatively spliced; TRIP8b; PEX5Rp;
                     TRIP8b_IsoB3(bs-2-4)"
                     /codon_start=1
                     /product="peroxisomal biogenesis factor 5-like protein
                     transcript variant 10"
                     /protein_id="AEH94560.1"
                     /translation="MQMSYLKSKEQGYGKLSSDEDLEIIVDQKQGKGSRAADKAVAMV
                     MKEIPREESAEEKPLLTVTSQLVNEQQESRPLLSPSIDDFLCETKSEAIAKPVTSNTA
                     VLTTGLDLLDLSEPVSQTQTKAKKSEPSSKSSSLKKKADGSDLISADAEQRAQALRGP
                     ETSSLDLDIQTQLEKWDDVKFHGDRTSKGHLMAERKSCSSRTGSKELLWSAEHRSQPE
                     LSTGKSALNSESASELELVAPAQARLTKEHRWGSALLSRNHSLEEEFERAKAAVESDT
                     EFWDKMQAEWEEMARRNWISENQEAQNQVTVSASEKGYYFHTENPFKDWPGAFEEGLK
                     RLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNN
                     LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS
                     SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS
                     LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLT
                     ALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLD
                     P"
ORIGIN      
        1 gaagattagc tttcttcctc ctcctagttc actcctctga ctgatgtgca aggtcttgca
       61 gaagccaggg acttgcattc tgggcttggc aaagtgctta ggaagacgac agggcttccc
      121 ggctgggagg agggaggaga gaggagagct gaagatcccc gcctgggctg gctcagctaa
      181 gcaaagtggg cagctcagta cttgaaagag gactgtgctc actcgctcgc tcgcactaga
      241 tatcaaaatc gggtcatgca gatgagctac ttgaaaagta aagaacaagg ctatggcaag
      301 ctaagcagtg acgaggacct ggaaataatt gttgaccaga agcagggaaa aggctctagg
      361 gctgcagata aggctgttgc catggtgatg aaggagatac cgagggagga gtctgcagaa
      421 gaaaagcccc tccttactgt gacatcacag ctggtgaatg agcaacaaga gagcagaccc
      481 ctcctgagcc cctccatcga cgacttcctc tgcgaaacca aatcggaggc cattgcaaag
      541 ccagtgacat ccaacacagc cgtgttgacc actggcttgg atctccttga cctgagtgaa
      601 cccgtctctc aaacccaaac caaagccaag aaatctgagc cctcatcaaa gagctcgtcc
      661 ctcaagaaga aagctgatgg ctccgacctc atcagtgcag atgctgagca gagagcacag
      721 gctctccgag ggccagagac atcatcctta gatttagaca ttcaaacaca actggaaaaa
      781 tgggatgatg tcaagtttca cggtgaccga acaagcaagg ggcatctcat ggcagaaagg
      841 aaatcatgct cttccagaac tgggtccaaa gagcttcttt ggtccgcaga acacagatct
      901 cagccagagc tgagtactgg gaaaagcgcc ctcaactctg agtcggcttc cgagttggaa
      961 cttgtagctc cagcacaggc tcggctgacc aaagagcatc gctggggaag tgccctgctc
     1021 tccaggaacc attccttgga agaggagttt gaaagggcaa aagcggcagt agagtcagat
     1081 acagagttct gggataagat gcaggcagaa tgggaggaaa tggcccggag gaactggata
     1141 tccgagaacc aggaagctca gaaccaagtc accgtctcgg ccagtgagaa gggatattac
     1201 ttccacactg aaaatccctt caaggactgg cctggagcat ttgaagaagg cttaaaaagg
     1261 ttgaaggaag gggacctgcc tgtcaccatc ctgttcatgg aagctgcaat tcttcaggac
     1321 cctggagacg ctgaggcatg gcagtttctt ggtataaccc aggctgagaa tgaaaatgag
     1381 caggcagcta ttgtcgccct ccagaggtgc ctggagttgc agcccaacaa cttgaaggct
     1441 ctgatggcct tggctgtaag ttacaccaac accagccacc agcaggatgc ttgtgaggca
     1501 ctgaagaact ggattaagca aaacccaaag tacaagtacc ttgtgaagaa caagaaaggc
     1561 tctccaggcc tcacacggcg gatgtctaaa tccccagttg acagctctgt tctggaagga
     1621 gtgaaggagt tgtacctgga agctgcccac caaaatggtg acatgattga cccagacctg
     1681 cagacaggtc tgggagttct gttccacctg agtggagagt tcaatagagc aatcgatgca
     1741 tttaatgctg ccttaacagt tcggccagag gattactcac tgtggaaccg tcttggggca
     1801 accttggcaa atggagaccg cagtgaggaa gctgtggagg cctacacgag agcactggag
     1861 atccagccag gtttcatccg ctccagatac aacctgggga tcagctgcat caacctgggt
     1921 gcctacagag aagcggtcag caacttcctc actgccctca gcttgcagag gaagagcagg
     1981 aaccagcagc aagtccctca ccctgccatc tccgggaaca tctgggccgc cctcaggatt
     2041 gccctgtcgc tgatggacca gccggagctc ttccaggccg ccaacctcgg tgacttggat
     2101 gtcctcctga gagctttcaa tttggatcct tgaaggaaaa gaagacaaga ataataaagg
     2161 atactaatgt gtcttctgtg ttattatact aaaaagggac aaaactattt tattatgaat
     2221 ttccaaaaca catttttttt aaaaaaggat aaagctgaga ggcaaaaggc catggtcata
     2281 taagccaagg gaattgattt ctacagatcc agtctctgtt cagacccaaa agcacaaagc
     2341 gaaggtcggg gtcaagagaa gaactgagat tctcaggaca aaccaagata aggtaactgc
     2401 actcgcttcc aaattgcaag tgtactttga gttatattgt tcctgtccca gctggtggca
     2461 catctgaggg acactcttgg gacataacat gacaatttgt ccacagtcag tgaactcagg
     2521 ctgtctttgt ctaccctttt gcaagactga acatagtttg ggccactggc aaatgtacac
     2581 atgcagccat tgcttccctc tcgcccactc taaccttgac tgtaagcctt tgttttcaga
     2641 gacagagagc tttgctggcg aaagcagttt ttgcactaga agtttttgct gttcccaatg
     2701 aaatcctttc taggattgta cataagcact ttaatatctt atttatgcct tgccgggctt
     2761 ctggcttgct gctccagttt ctaacttggg gggtagggaa gggtgggata aaagacttca
     2821 gaactcagag ttgttagctc agtggaccaa ataaaaaaat tataagaata gtttttctta
     2881 gcagagggtt tgggaagtgt gtttgcatag aatgtaaata tgttaaacac aattttcttt
     2941 gtgtgctttc tgggagccca tggatctctt gtgaagcaaa gttcccaggg cgctctccct
     3001 gcagaaggga gcttggcgat tctgcaattt ctaatgagtt gtgttaaact tgttttaata
     3061 tcctgttttc ctggctctct aactgccttg cacaatgata tttcctttaa actgttacta
     3121 tttcaaatgg tatttcttaa gcgtgttaaa tacaattttc ctaaagtcga agtgtttcct
     3181 gagttccgta acaaccacta ccacctcccg ccactgcaca cacaccccca cccccacccc
     3241 aactgtccac atcctcacat tgtaagtgac aggagggtca catttgtaac ccagcagtac
     3301 agagcagcag gaagacacat gcaacactca gcaatagcca gaccttctcc actggccgag
     3361 aaatctgact tcactgttgg cctcctacag attt
//
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