Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download features.
Download gene features.
GenBank: HQ646195.1
FASTA Graphics
LOCUS HQ646195 3394 bp mRNA linear ROD 19-JUN-2011 DEFINITION Mus musculus strain C57BL/6J peroxisomal biogenesis factor 5-like protein transcript variant 10 (Pex5l) mRNA, complete cds, alternatively spliced. ACCESSION HQ646195 VERSION HQ646195.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3394) AUTHORS Lewis,A.S., Schwartz,E., Chan,C.S., Noam,Y., Shin,M., Wadman,W.J., Surmeier,D.J., Baram,T.Z., Macdonald,R.L. and Chetkovich,D.M. TITLE Alternatively spliced isoforms of TRIP8b differentially control h channel trafficking and function JOURNAL J. Neurosci. 29 (19), 6250-6265 (2009) PUBMED 19439603 REFERENCE 2 (bases 1 to 3394) AUTHORS Chetkovich,D.M. and Lewis,A.S. TITLE Direct Submission JOURNAL Submitted (23-NOV-2010) Ruth & Ken Davee Department of Neurology and Clinical Neuroscience, Northwestern University Feinberg School of Medicine, 303 E Chicago Ave, Ward 10-201, Chicago, IL 60611, USA FEATURES Location/Qualifiers source 1..3394 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="taxon:10090" /tissue_type="brain" gene 1..3394 /gene="Pex5l" CDS 256..2133 /gene="Pex5l" /note="alternatively spliced; TRIP8b; PEX5Rp; TRIP8b_IsoB3(bs-2-4)" /codon_start=1 /product="peroxisomal biogenesis factor 5-like protein transcript variant 10" /protein_id="AEH94560.1" /translation="MQMSYLKSKEQGYGKLSSDEDLEIIVDQKQGKGSRAADKAVAMV MKEIPREESAEEKPLLTVTSQLVNEQQESRPLLSPSIDDFLCETKSEAIAKPVTSNTA VLTTGLDLLDLSEPVSQTQTKAKKSEPSSKSSSLKKKADGSDLISADAEQRAQALRGP ETSSLDLDIQTQLEKWDDVKFHGDRTSKGHLMAERKSCSSRTGSKELLWSAEHRSQPE LSTGKSALNSESASELELVAPAQARLTKEHRWGSALLSRNHSLEEEFERAKAAVESDT EFWDKMQAEWEEMARRNWISENQEAQNQVTVSASEKGYYFHTENPFKDWPGAFEEGLK RLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNN LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLT ALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLD P" ORIGIN 1 gaagattagc tttcttcctc ctcctagttc actcctctga ctgatgtgca aggtcttgca 61 gaagccaggg acttgcattc tgggcttggc aaagtgctta ggaagacgac agggcttccc 121 ggctgggagg agggaggaga gaggagagct gaagatcccc gcctgggctg gctcagctaa 181 gcaaagtggg cagctcagta cttgaaagag gactgtgctc actcgctcgc tcgcactaga 241 tatcaaaatc gggtcatgca gatgagctac ttgaaaagta aagaacaagg ctatggcaag 301 ctaagcagtg acgaggacct ggaaataatt gttgaccaga agcagggaaa aggctctagg 361 gctgcagata aggctgttgc catggtgatg aaggagatac cgagggagga gtctgcagaa 421 gaaaagcccc tccttactgt gacatcacag ctggtgaatg agcaacaaga gagcagaccc 481 ctcctgagcc cctccatcga cgacttcctc tgcgaaacca aatcggaggc cattgcaaag 541 ccagtgacat ccaacacagc cgtgttgacc actggcttgg atctccttga cctgagtgaa 601 cccgtctctc aaacccaaac caaagccaag aaatctgagc cctcatcaaa gagctcgtcc 661 ctcaagaaga aagctgatgg ctccgacctc atcagtgcag atgctgagca gagagcacag 721 gctctccgag ggccagagac atcatcctta gatttagaca ttcaaacaca actggaaaaa 781 tgggatgatg tcaagtttca cggtgaccga acaagcaagg ggcatctcat ggcagaaagg 841 aaatcatgct cttccagaac tgggtccaaa gagcttcttt ggtccgcaga acacagatct 901 cagccagagc tgagtactgg gaaaagcgcc ctcaactctg agtcggcttc cgagttggaa 961 cttgtagctc cagcacaggc tcggctgacc aaagagcatc gctggggaag tgccctgctc 1021 tccaggaacc attccttgga agaggagttt gaaagggcaa aagcggcagt agagtcagat 1081 acagagttct gggataagat gcaggcagaa tgggaggaaa tggcccggag gaactggata 1141 tccgagaacc aggaagctca gaaccaagtc accgtctcgg ccagtgagaa gggatattac 1201 ttccacactg aaaatccctt caaggactgg cctggagcat ttgaagaagg cttaaaaagg 1261 ttgaaggaag gggacctgcc tgtcaccatc ctgttcatgg aagctgcaat tcttcaggac 1321 cctggagacg ctgaggcatg gcagtttctt ggtataaccc aggctgagaa tgaaaatgag 1381 caggcagcta ttgtcgccct ccagaggtgc ctggagttgc agcccaacaa cttgaaggct 1441 ctgatggcct tggctgtaag ttacaccaac accagccacc agcaggatgc ttgtgaggca 1501 ctgaagaact ggattaagca aaacccaaag tacaagtacc ttgtgaagaa caagaaaggc 1561 tctccaggcc tcacacggcg gatgtctaaa tccccagttg acagctctgt tctggaagga 1621 gtgaaggagt tgtacctgga agctgcccac caaaatggtg acatgattga cccagacctg 1681 cagacaggtc tgggagttct gttccacctg agtggagagt tcaatagagc aatcgatgca 1741 tttaatgctg ccttaacagt tcggccagag gattactcac tgtggaaccg tcttggggca 1801 accttggcaa atggagaccg cagtgaggaa gctgtggagg cctacacgag agcactggag 1861 atccagccag gtttcatccg ctccagatac aacctgggga tcagctgcat caacctgggt 1921 gcctacagag aagcggtcag caacttcctc actgccctca gcttgcagag gaagagcagg 1981 aaccagcagc aagtccctca ccctgccatc tccgggaaca tctgggccgc cctcaggatt 2041 gccctgtcgc tgatggacca gccggagctc ttccaggccg ccaacctcgg tgacttggat 2101 gtcctcctga gagctttcaa tttggatcct tgaaggaaaa gaagacaaga ataataaagg 2161 atactaatgt gtcttctgtg ttattatact aaaaagggac aaaactattt tattatgaat 2221 ttccaaaaca catttttttt aaaaaaggat aaagctgaga ggcaaaaggc catggtcata 2281 taagccaagg gaattgattt ctacagatcc agtctctgtt cagacccaaa agcacaaagc 2341 gaaggtcggg gtcaagagaa gaactgagat tctcaggaca aaccaagata aggtaactgc 2401 actcgcttcc aaattgcaag tgtactttga gttatattgt tcctgtccca gctggtggca 2461 catctgaggg acactcttgg gacataacat gacaatttgt ccacagtcag tgaactcagg 2521 ctgtctttgt ctaccctttt gcaagactga acatagtttg ggccactggc aaatgtacac 2581 atgcagccat tgcttccctc tcgcccactc taaccttgac tgtaagcctt tgttttcaga 2641 gacagagagc tttgctggcg aaagcagttt ttgcactaga agtttttgct gttcccaatg 2701 aaatcctttc taggattgta cataagcact ttaatatctt atttatgcct tgccgggctt 2761 ctggcttgct gctccagttt ctaacttggg gggtagggaa gggtgggata aaagacttca 2821 gaactcagag ttgttagctc agtggaccaa ataaaaaaat tataagaata gtttttctta 2881 gcagagggtt tgggaagtgt gtttgcatag aatgtaaata tgttaaacac aattttcttt 2941 gtgtgctttc tgggagccca tggatctctt gtgaagcaaa gttcccaggg cgctctccct 3001 gcagaaggga gcttggcgat tctgcaattt ctaatgagtt gtgttaaact tgttttaata 3061 tcctgttttc ctggctctct aactgccttg cacaatgata tttcctttaa actgttacta 3121 tttcaaatgg tatttcttaa gcgtgttaaa tacaattttc ctaaagtcga agtgtttcct 3181 gagttccgta acaaccacta ccacctcccg ccactgcaca cacaccccca cccccacccc 3241 aactgtccac atcctcacat tgtaagtgac aggagggtca catttgtaac ccagcagtac 3301 agagcagcag gaagacacat gcaacactca gcaatagcca gaccttctcc actggccgag 3361 aaatctgact tcactgttgg cctcctacag attt //
Whole sequence Selected region from: to:
All features Gene, RNA, and CDS features only
Show sequence Show reverse complement Show gap features
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on