LOCUS BC004542 2166 bp mRNA linear PRI 03-NOV-2008
DEFINITION Homo sapiens plexin B2, mRNA (cDNA clone IMAGE:3951420), partial
cds.
ACCESSION BC004542
VERSION BC004542.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004542.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2166
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3951420"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2166
/gene="PLXNB2"
/gene_synonym="dJ402G11.3"
/gene_synonym="MM1"
/gene_synonym="Nbla00445"
/gene_synonym="PLEXB2"
/db_xref="GeneID:23654"
/db_xref="HGNC:HGNC:9104"
/db_xref="MIM:604293"
CDS <1..1429
/gene="PLXNB2"
/gene_synonym="dJ402G11.3"
/gene_synonym="MM1"
/gene_synonym="Nbla00445"
/gene_synonym="PLEXB2"
/codon_start=2
/product="PLXNB2 protein"
/protein_id="AAH04542.2"
/db_xref="GeneID:23654"
/db_xref="HGNC:HGNC:9104"
/db_xref="MIM:604293"
/translation="YYTDIMHTLFLELLEQYVVAKNPKLMLRRSETVVERMLSNWMSI
CLYQYLKDSAGEPLYKLFKAIKHQVEKGPVDAVQKKAKYTLNDTGLLGDDVEYAPLTV
SVIVQDEGVDAIPVKVLNCDTISQVKEKIIDQVYRGQPCSCWPRPDSVVLEWRPGSTA
QILSDLDLTSQQEGRWKRVNTLMHYNVRDGATLILSKVGVSQQPEDSQQDLPGERHAL
LEEENRVWHLVRPTDEVDEGKSKRGSVKEKERTKAITEIYLTRLLSVKGTLQQFVDNF
FQSVLAPGHAVPPAVKYFFDFLDEQAEKHNIQDEDTIHIWKTNSLPLRFWVNILKNPH
FIFDVHVHEVVDASLSVIAQTFMDACTRTEHKLSRDSPSNKLLYAKEISTYKKMVEDY
YKGIRQMVQVSDQDMNTHLAEISRAHTDSLNTLVALHQLYQYTQKYYDEIINALEEDP
AAQKMQLAFRLQQIAAALENKVTDL"
ORIGIN
1 gtactacacg gacatcatgc acacgctctt cctggagctc ctggagcagt acgtggtggc
61 caagaacccc aagctgatgc tgcgcaggtc tgagactgtg gtggagagga tgctgtccaa
121 ctggatgtcc atctgcctgt accagtacct caaggacagt gccggggagc ccctgtacaa
181 gctcttcaag gccatcaaac atcaggtgga aaagggcccg gtggatgcgg tacagaagaa
241 ggccaagtac actctcaacg acacggggct gctgggggat gatgtggagt acgcacccct
301 gacggtgagc gtgatcgtgc aggacgaggg agtggacgcc atcccggtga aggtcctcaa
361 ctgtgacacc atctcccagg tcaaggagaa gatcattgac caggtgtacc gtgggcagcc
421 ctgctcctgc tggcccaggc cagacagcgt ggtcctggag tggcgtccgg gctccacagc
481 gcagatcctg tcggacctgg acctgacgtc acagcaggag ggccggtgga agcgcgtcaa
541 cacccttatg cactacaatg tccgggatgg agccaccctc atcctgtcca aggtgggggt
601 ctcccagcag ccggaggaca gccagcagga cctgcctggg gagcgccatg ccctcctgga
661 ggaggagaac cgggtgtggc acctggtgcg gccgaccgac gaggtggacg agggcaagtc
721 caagagaggc agcgtgaaag agaaggagcg gacgaaggcc atcaccgaga tctacctgac
781 gcggctgctc tcagtcaagg gcacactgca gcagtttgtg gacaacttct tccagagcgt
841 gctggcgcct gggcacgcgg tgccacctgc agtcaagtac ttcttcgact tcctggacga
901 gcaggcagag aagcacaaca tccaggatga agacaccatc cacatctgga agacgaacag
961 tttaccgctc cggttctggg tgaacatcct caagaacccc cacttcatct ttgacgtgca
1021 tgtccacgag gtggtggacg cctcgctgtc agtcatcgcg cagaccttca tggatgcctg
1081 cacgcgcacg gagcataagc tgagccgcga ttctcccagc aacaagctgc tgtacgccaa
1141 ggagatctcc acctacaaga agatggtgga ggattactac aaggggatcc ggcagatggt
1201 gcaggtcagc gaccaggaca tgaacacaca cctggcagag atttcccggg cgcacacgga
1261 ctccttgaac accctcgtgg cactccacca gctctaccaa tacacgcaga agtactatga
1321 cgagatcatc aatgccttgg aggaggatcc tgccgcccag aagatgcagc tggccttccg
1381 cctgcagcag attgccgctg cactggagaa caaggtcact gacctctgac ctacaatctc
1441 cagtgctgcc ttgggacata ggtacctgag gtacctgaga gcccctcagg ggaggaggcc
1501 gagtggctgt ggctgaggcc cccaccctcc cctggaacgc gccccaagcc ggagtgggtg
1561 cagccggaac ccgcccagcg tctagactgt agcatcttcc tctgagcaat accgccgggc
1621 accgcaccag caccagcccc agccccagct ccctccggcc gcagaaccag catcgggtgt
1681 tcactgtcga gtctcgagtg atttgaaaat gtgccttacg ctgccacgct gggggcagct
1741 ggcctccgcc tccgcccacg caccagcagc cgcctccatg ccctaggttg ggcccctggg
1801 ggatctgagg gcctgtggcc cccagggcaa gttcccagat cctatgtctg tctgtccacc
1861 acgagatggg aggaggagaa aaagcggtac gatgccttcc tgacctcacc ggcctcccca
1921 agggtgccgg cactctgggt ggactcacgg ctgctgggcc ccacgtcaaa ggtcaagtga
1981 gacgtaggtc aagtcctacg tcggggccca gacatcctgg ggtcctggtc tgtcagacag
2041 gctgccctag agccccaccc agtccggggg gactgggagc agttccaaga ccaccccacc
2101 cctttttgta aatcttgttc attgtaaatc aaatacagcg tctttttcaa aaaaaaaaaa
2161 aaaaaa
//