LOCUS BC086972 1346 bp mRNA linear ROD 15-JUL-2006
DEFINITION Rattus norvegicus carbonic anhydrase 11, mRNA (cDNA clone MGC:93050
IMAGE:7190978), complete cds.
ACCESSION BC086972
VERSION BC086972.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Howard Jacobs
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 186 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56799430.
FEATURES Location/Qualifiers
source 1..1346
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:93050 IMAGE:7190978"
/tissue_type="Heart, rat (Brown Norway)"
/clone_lib="NIH_MGC_234"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1346
/gene="Car11"
/gene_synonym="CAR-XI"
/db_xref="GeneID:308588"
/db_xref="RGD:735155"
CDS 233..1219
/gene="Car11"
/gene_synonym="CAR-XI"
/codon_start=1
/product="carbonic anhydrase 11"
/protein_id="AAH86972.1"
/db_xref="GeneID:308588"
/db_xref="RGD:735155"
/translation="MGGAARLSAPQALVLWAALGAAAHIGPAPDPEDWWSYKENLQGN
FVPGPPFWGLVNAAWSLCAVGKRQSPVDVELKRVLYDPFLPPLRLSTGGEKLRGTLYN
TGRHVSFLPASRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQL
IHFNQELYGNLSAASRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYF
LQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNP
PSQIFQSLSGNGRPLQPLAHRALRGNRDPRHPERRCRGPNYRLHVDGGPHGR"
ORIGIN
1 cggggccggc gagggcgatc gcagcttcgg gaggtagaaa gagtgcaggg cgcgggccca
61 ggcgggcgga ggagtgagcg tcaaacgggc tctggggtgc acggtcccag cccttgcatc
121 tcgggagctg gggctcccgt tctggggaca gccaggctgg aagtcccagg agaaggggag
181 ggaagagcta gggggtcggg cgctgggaaa gggtcgctcc gaggcctctt ggatgggggg
241 tgcggctcgc ctgagcgccc ctcaagcgct ggtactctgg gccgcactgg gagcggcagc
301 tcacatcgga cccgcacctg atcccgagga ctggtggagc tacaaggaga atctccaggg
361 aaacttcgtg ccagggcctc ccttctgggg cctggtgaac gctgcctgga gtctgtgcgc
421 tgtggggaag cggcagagcc ctgtggatgt ggagctgaag cgggttcttt atgacccttt
481 tctgcccccg ctcaggctca gcaccggggg agagaagctc cggggaacct tatacaacac
541 tggccgccat gtctccttcc tacctgcatc ccggcctgtg gtcaacgtgt ctgggggtcc
601 ccttctctat agccaccgac tcagtgaact gcggctgctg tttggagctc gagatggtgc
661 tggctccgaa caccagatca accatcaagg cttctctgct gaggtgcagc taatccactt
721 caaccaagaa ctctatggga atctcagtgc tgcctcaagg ggccccaatg gcctggccat
781 tctcagcctc tttgtcaacg tggctggcag ctccaacccg ttccttagtc gcctcctcaa
841 ccgggacact attacccgaa tctcctacaa aaatgatgcc tactttcttc aagacctgag
901 cctggagctc ctgttcccgg aatcctttgg cttcatcacc tatcagggat ctctcagcac
961 tcctccctgc tctgagactg tcacctggat cctcatcgac agggctctca atattacctc
1021 cctccagatg cactccctga gactcctgag ccagaatccc ccctcccaga tcttccagag
1081 cctcagtggt aatggccggc ccttgcagcc cctggcccac agagccttga ggggcaacag
1141 ggacccccgg caccccgaga ggcgctgccg aggccccaac taccgcctgc atgtggatgg
1201 tggtcctcat ggtcgctgag actccccaac gaggattacg cccgcctgtt ctgagtttcc
1261 tcaccagggg aggggaattc accccaaaac aaagctatta aagggactga atgtttccag
1321 ttaaaaaaaa aaaaaaaaaa aaaaaa
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