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Rattus norvegicus carbonic anhydrase 11, mRNA (cDNA clone MGC:93050 IMAGE:7190978), complete cds

GenBank: BC086972.1

FASTA Graphics 

LOCUS       BC086972                1346 bp    mRNA    linear   ROD 15-JUL-2006
DEFINITION  Rattus norvegicus carbonic anhydrase 11, mRNA (cDNA clone MGC:93050
            IMAGE:7190978), complete cds.
ACCESSION   BC086972
VERSION     BC086972.1
KEYWORDS    MGC.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1346)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Howard Jacobs
            cDNA Library Preparation: Express Genomics
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 186 Row: h Column: 11
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 56799430.
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /clone="MGC:93050 IMAGE:7190978"
                     /tissue_type="Heart, rat (Brown Norway)"
                     /clone_lib="NIH_MGC_234"
                     /lab_host="DH10B"
                     /note="Vector: pExpress1"
     gene            1..1346
                     /gene="Car11"
                     /gene_synonym="CAR-XI"
                     /db_xref="GeneID:308588"
                     /db_xref="RGD:735155"
     CDS             233..1219
                     /gene="Car11"
                     /gene_synonym="CAR-XI"
                     /codon_start=1
                     /product="carbonic anhydrase 11"
                     /protein_id="AAH86972.1"
                     /db_xref="GeneID:308588"
                     /db_xref="RGD:735155"
                     /translation="MGGAARLSAPQALVLWAALGAAAHIGPAPDPEDWWSYKENLQGN
                     FVPGPPFWGLVNAAWSLCAVGKRQSPVDVELKRVLYDPFLPPLRLSTGGEKLRGTLYN
                     TGRHVSFLPASRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQL
                     IHFNQELYGNLSAASRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYF
                     LQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNP
                     PSQIFQSLSGNGRPLQPLAHRALRGNRDPRHPERRCRGPNYRLHVDGGPHGR"
ORIGIN      
        1 cggggccggc gagggcgatc gcagcttcgg gaggtagaaa gagtgcaggg cgcgggccca
       61 ggcgggcgga ggagtgagcg tcaaacgggc tctggggtgc acggtcccag cccttgcatc
      121 tcgggagctg gggctcccgt tctggggaca gccaggctgg aagtcccagg agaaggggag
      181 ggaagagcta gggggtcggg cgctgggaaa gggtcgctcc gaggcctctt ggatgggggg
      241 tgcggctcgc ctgagcgccc ctcaagcgct ggtactctgg gccgcactgg gagcggcagc
      301 tcacatcgga cccgcacctg atcccgagga ctggtggagc tacaaggaga atctccaggg
      361 aaacttcgtg ccagggcctc ccttctgggg cctggtgaac gctgcctgga gtctgtgcgc
      421 tgtggggaag cggcagagcc ctgtggatgt ggagctgaag cgggttcttt atgacccttt
      481 tctgcccccg ctcaggctca gcaccggggg agagaagctc cggggaacct tatacaacac
      541 tggccgccat gtctccttcc tacctgcatc ccggcctgtg gtcaacgtgt ctgggggtcc
      601 ccttctctat agccaccgac tcagtgaact gcggctgctg tttggagctc gagatggtgc
      661 tggctccgaa caccagatca accatcaagg cttctctgct gaggtgcagc taatccactt
      721 caaccaagaa ctctatggga atctcagtgc tgcctcaagg ggccccaatg gcctggccat
      781 tctcagcctc tttgtcaacg tggctggcag ctccaacccg ttccttagtc gcctcctcaa
      841 ccgggacact attacccgaa tctcctacaa aaatgatgcc tactttcttc aagacctgag
      901 cctggagctc ctgttcccgg aatcctttgg cttcatcacc tatcagggat ctctcagcac
      961 tcctccctgc tctgagactg tcacctggat cctcatcgac agggctctca atattacctc
     1021 cctccagatg cactccctga gactcctgag ccagaatccc ccctcccaga tcttccagag
     1081 cctcagtggt aatggccggc ccttgcagcc cctggcccac agagccttga ggggcaacag
     1141 ggacccccgg caccccgaga ggcgctgccg aggccccaac taccgcctgc atgtggatgg
     1201 tggtcctcat ggtcgctgag actccccaac gaggattacg cccgcctgtt ctgagtttcc
     1261 tcaccagggg aggggaattc accccaaaac aaagctatta aagggactga atgtttccag
     1321 ttaaaaaaaa aaaaaaaaaa aaaaaa
//
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